RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 CCNJLQ8IV13 435 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 FAM177A1Q8N128 213 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 GIMAP8Q8ND71 665 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 SEPT1Q8WYJ6 367 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 LENG9Q96B70 501 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 SCARF2Q96GP6 870 aaPredicted RBP10.71□□□□□ -0.69
CLCN3-205ENST00000506924 HDAC6Q9UBN7 1215 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 SLC9A2Q9UBY0 812 aa10.71□□□□□ -0.69
CLCN3-205ENST00000506924 SCN10AQ9Y5Y9 1956 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 NFASCO94856 1347 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 MROH7Q68CQ1 1323 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 DHX15O43143 795 aaKnown RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 CHMP2AO43633 222 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 CCNE2O96020 404 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 F2P00734 622 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 CD4P01730 458 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 ACTR2P61160 394 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 SETQ01105 290 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 GNL2Q13823 731 aaKnown RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 SAFBQ15424 915 aaKnown RBP eCLIP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 GDF6Q6KF10 455 aaPredicted RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 TRMT1LQ7Z2T5 733 aaKnown RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 NEK8Q86SG6 692 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 C7orf31Q8N865 590 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 GLG1Q92896 1179 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 BADQ92934 168 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 TOX2Q96NM4 488 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 POP1Q99575 1024 aaKnown RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 RNPEPQ9H4A4 650 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 LIN7BQ9HAP6 207 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 ZFYVE1Q9HBF4 777 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 SRA1Q9HD15 236 aaKnown RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 LATS2Q9NRM7 1088 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 DDX25Q9UHL0 483 aaKnown RBP10.7□□□□□ -0.7
CLCN3-205ENST00000506924 SMC3Q9UQE7 1217 aa10.7□□□□□ -0.7
CLCN3-205ENST00000506924 UMODL1Q5DID0 1318 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 KIF28PB7ZC32 967 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 HAS3O00219 553 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 RAG1P15918 1043 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 GNA15P30679 374 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 CYP2C18P33260 490 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 PTGISQ16647 500 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.69□□□□□ -0.7
CLCN3-205ENST00000506924 Q4G0T1 1027 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 NFRKBQ6P4R8 1299 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 FBXO18Q8NFZ0 1043 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 EPS8L3Q8TE67 593 aaKnown RBP10.69□□□□□ -0.7
CLCN3-205ENST00000506924 TCF12Q99081 682 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 PCYT2Q99447 389 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 LBHD1Q9BQE6 289 aaPredicted RBP10.69□□□□□ -0.7
CLCN3-205ENST00000506924 KATNAL1Q9BW62 490 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 NOP53Q9NZM5 478 aaKnown RBP10.69□□□□□ -0.7
CLCN3-205ENST00000506924 TBX21Q9UL17 535 aa10.69□□□□□ -0.7
CLCN3-205ENST00000506924 CYP3A7-CYP3A51PA0A087WV96 503 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 KIAA0355O15063 1070 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 MARCH6O60337 910 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 GAS7O60861 476 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 GADD45BO75293 160 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-205ENST00000506924 SMIM10L2AP0DMW4 78 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 SMIM10L2BP0DMW5 78 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 ACPPP15309 386 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 CYP3A7P24462 503 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 CCL23P55773 120 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 CUL4AQ13619 759 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 LRCH2Q5VUJ6 765 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 MCTP1Q6DN14 999 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 SWSAP1Q6NVH7 229 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 DTWD1Q8N5C7 304 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 SLC5A5Q92911 643 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 ZBTB10Q96DT7 871 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 UNC45AQ9H3U1 944 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 HIPK3Q9H422 1215 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 AZI2Q9H6S1 392 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 TBC1D22BQ9NU19 505 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 SETD4Q9NVD3 440 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 GTF2IRD1Q9UHL9 959 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 TCEAL9Q9UHQ7 104 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 ZNF215Q9UL58 517 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-205ENST00000506924 SAMM50Q9Y512 469 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.68□□□□□ -0.7
CLCN3-205ENST00000506924 CEP290O15078 2479 aa10.68□□□□□ -0.7
CLCN3-205ENST00000506924 TRIP12Q14669 1992 aaPredicted RBP10.67□□□□□ -0.7
CLCN3-205ENST00000506924 C17orf102A2RUQ5 167 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 H3BQV1 296 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 K7ELQ4 463 aaPredicted RBP10.67□□□□□ -0.7
CLCN3-205ENST00000506924 TIMP1P01033 207 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 SUPT20HL2P0C7V6 817 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 MCM7P33993 719 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 STAT5BP51692 787 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 SNRPNP63162 240 aaKnown RBP10.67□□□□□ -0.7
CLCN3-205ENST00000506924 IGBP1P78318 339 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 ZNF174Q15697 407 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 ABHD15Q6UXT9 468 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 ALYREFQ86V81 257 aaKnown RBP10.67□□□□□ -0.7
CLCN3-205ENST00000506924 WFDC8Q8IUA0 241 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 MAP4K3Q8IVH8 894 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 CCDC60Q8IWA6 550 aaPredicted RBP10.67□□□□□ -0.7
CLCN3-205ENST00000506924 ETNPPLQ8TBG4 499 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 BSNDQ8WZ55 320 aa10.67□□□□□ -0.7
CLCN3-205ENST00000506924 WNT8BQ93098 351 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms