RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 KIF20AO95235 890 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 GPC3P51654 580 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 POLGP54098 1239 aaPredicted RBP15.24■□□□□ 0.03
SERF1B-204ENST00000506542 UBASH3AP57075 661 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 PAK2Q13177 524 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 MAEAQ7L5Y9 396 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 RHPN2Q8IUC4 686 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 NOC3LQ8WTT2 800 aaKnown RBP15.24■□□□□ 0.03
SERF1B-204ENST00000506542 MAP7D2Q96T17 732 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 DUSP9Q99956 384 aaKnown RBP15.24■□□□□ 0.03
SERF1B-204ENST00000506542 THAP9Q9H5L6 903 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 ZNF576Q9H609 170 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 PARVGQ9HBI0 331 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 XPNPEP1Q9NQW7 623 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 SUCLA2Q9P2R7 463 aaPredicted RBP15.24■□□□□ 0.03
SERF1B-204ENST00000506542 SEL1LQ9UBV2 794 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 ST3GAL5Q9UNP4 418 aa15.24■□□□□ 0.03
SERF1B-204ENST00000506542 SPTBN5Q9NRC6 3674 aaKnown RBP15.24■□□□□ 0.03
SERF1B-204ENST00000506542 COL4A6Q14031 1691 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 A0A087WZ62 844 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 EPOPA6NHQ4 379 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 RFXAPO00287 272 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 ENPP3O14638 875 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 TLL1O43897 1013 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 PTMAP06454 111 aaKnown RBP15.23■□□□□ 0.03
SERF1B-204ENST00000506542 LRRC63Q05C16 580 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 SPAG1Q07617 926 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 MAPK7Q13164 816 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 EMC2Q15006 297 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 HS1BP3Q53T59 392 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 EPM2AIP1Q7L775 607 aaPredicted RBP15.23■□□□□ 0.03
SERF1B-204ENST00000506542 OTUD6AQ7L8S5 288 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 APTXQ7Z2E3 356 aaKnown RBP15.23■□□□□ 0.03
SERF1B-204ENST00000506542 SCFD1Q8WVM8 642 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 NLRP7Q8WX94 980 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 MYLIPQ8WY64 445 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 NLRP4Q96MN2 994 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 SCLT1Q96NL6 688 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 FDXACB1Q9BRP7 624 aaPredicted RBP15.23■□□□□ 0.03
SERF1B-204ENST00000506542 ZBED2Q9BTP6 218 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 TIPINQ9BVW5 301 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 DHX33Q9H6R0 707 aaKnown RBP15.23■□□□□ 0.03
SERF1B-204ENST00000506542 ERVK-5Q9HDB9 667 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 GPRC5CQ9NQ84 441 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 MSRAQ9UJ68 235 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 MTUS1Q9ULD2 1270 aa15.23■□□□□ 0.03
SERF1B-204ENST00000506542 USO1O60763 962 aaKnown RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 HIP1RO75146 1068 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 RPS6KA5O75582 802 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 GJB5O95377 273 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SLC34A2O95436 690 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 TMOD1P28289 359 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 GATMP50440 423 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 CRYBB1P53674 252 aaPredicted RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 ZCWPW2Q504Y3 356 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 PPP2R2DQ66LE6 453 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 DAW1Q8N136 415 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 MYCT1Q8N699 235 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 CSGALNACT2Q8N6G5 542 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SPC24Q8NBT2 197 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 PRPF31Q8WWY3 499 aaKnown RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 NAP1L5Q96NT1 182 aaPredicted RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 CDX2Q99626 313 aaPredicted RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 PRDM12Q9H4Q4 367 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 MRPL44Q9H9J2 332 aaKnown RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 PCDHA11Q9Y5I1 949 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SFI1A8K8P3 1242 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 GOLGA6L6A8MZA4 724 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 AMHP03971 560 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SRGAP2CP0DJJ0 459 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 CASP5P51878 434 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 BMT2Q1RMZ1 405 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 GPR153Q6NV75 609 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 IRF2BP1Q8IU81 584 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 DRC7Q8IY82 874 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 PHOSPHO2Q8TCD6 241 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SLC7A3Q8WY07 619 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 FIZ1Q96SL8 496 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SRRTQ9BXP5 876 aaKnown RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 SLC28A3Q9HAS3 691 aa15.22■□□□□ 0.03
SERF1B-204ENST00000506542 LIMA1Q9UHB6 759 aaKnown RBP15.22■□□□□ 0.03
SERF1B-204ENST00000506542 VCANP13611 3396 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
SERF1B-204ENST00000506542 A0A1B0GTH6 734 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 LRRC10BA6NIK2 292 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 KCNJ18B7U540 433 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 TPM3P06753 285 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 EEF1GP26641 437 aaKnown RBP15.21■□□□□ 0.03
SERF1B-204ENST00000506542 KCNJ12Q14500 433 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 RAB30Q15771 203 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 TCP11X2Q5H9J9 407 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 ASAP3Q8TDY4 903 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 APBB2Q92870 758 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 TOP1MTQ969P6 601 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 TSG101Q99816 390 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 KCTD10Q9H3F6 313 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 MINDY3Q9H8M7 445 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 INTS13Q9NVM9 706 aa15.21■□□□□ 0.03
SERF1B-204ENST00000506542 NLRC5Q86WI3 1866 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms