RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 SPATA31C2B4DYI2 1134 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 NOP56O00567 594 aaKnown RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 CBFA2T3O75081 653 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 RPS6KA5O75582 802 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 ZMYND10O75800 440 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 RPLP2P05387 115 aaKnown RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 ADH1AP07327 375 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 SNHG28P0DPA3 235 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 PDHBP11177 359 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 INSRRP14616 1297 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 ENGP17813 658 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 BCKDHBP21953 392 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 MARK3P27448 753 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 IL12RB1P42701 662 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 MAPK8P45983 427 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 SOX9P48436 509 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 MLLT6P55198 1093 aaPredicted RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 TFAP4Q01664 338 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 UBAP2LQ14157 1087 aaKnown RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 GRM2Q14416 872 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 SLC5A9Q2M3M2 681 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 ARHGEF16Q5VV41 709 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 TOGARAM2Q6ZUX3 1019 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 KRT25Q7Z3Z0 450 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 GLRX5Q86SX6 157 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 AMOTL1Q8IY63 956 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 KIAA0319LQ8IZA0 1049 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 TMEM87AQ8NBN3 555 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 INPP4AQ96PE3 977 aaPredicted RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 STRBPQ96SI9 672 aaKnown RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 CPVLQ9H3G5 476 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF768Q9H5H4 540 aaKnown RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 PIDD1Q9HB75 910 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 FSCN3Q9NQT6 498 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 MRPL17Q9NRX2 175 aaKnown RBP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 TMEM74BQ9NUR3 256 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 TBC1D13Q9NVG8 400 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 HCFC1R1Q9NWW0 138 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.9□□□□□ -1.79
TCOF1-208ENST00000506063 PCDHB15Q9Y5E8 787 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 SDK2Q58EX2 2172 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 FRMPD4Q14CM0 1322 aa3.9□□□□□ -1.79
TCOF1-208ENST00000506063 ARID2Q68CP9 1835 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 A0A0U1RQF3 1178 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 SMIM35A0A1B0GVV1 85 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 MINDY4BA8MYZ0 360 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 GOLIM4O00461 696 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 SH3BP5O60239 455 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF862O60290 1169 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 GPR32O75388 356 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 DDHD2O94830 711 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 SOD2P04179 222 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TSPY3P0CV98 308 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TSPY8P0CW00 308 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 HSPD1P10809 573 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 MYCLP12524 364 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ADSSP30520 456 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 RDXP35241 583 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TCF7P36402 384 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF76P36508 570 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 AFF1P51825 1210 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 AK2P54819 239 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 IGBP1P78318 339 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 DSG1Q02413 1049 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TLE3Q04726 772 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF543Q08ER8 600 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 PLCB4Q15147 1175 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TTF1Q15361 905 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TRIP6Q15654 476 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ELF2Q15723 593 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 CCDC96Q2M329 555 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 PKDCCQ504Y2 493 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TRIM61Q5EBN2 209 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 PEAR1Q5VY43 1037 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 GIMAP6Q6P9H5 292 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 VITQ6UXI7 678 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF574Q6ZN55 896 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 PLEKHM2Q8IWE5 1019 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ABI1Q8IZP0 508 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ZNF444Q8N0Y2 327 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 OR2I1PQ8NGU4 316 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 SSH3Q8TE77 659 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 NANOS1Q8WY41 292 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 ING5Q8WYH8 240 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 CHFRQ96EP1 664 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 LIN37Q96GY3 246 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 HERC2P3Q9BVR0 1158 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 MRPL9Q9BYD2 267 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 BRD9Q9H8M2 597 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 CHST7Q9NS84 486 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TCP11L1Q9NUJ3 509 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 KIAA1522Q9P206 1035 aaPredicted RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 DNMT3BQ9UBC3 853 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 FBXW11Q9UKB1 542 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 PNMA2Q9UL42 364 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 KCNH3Q9ULD8 1083 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 MTMR7Q9Y216 660 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 MAN2B2Q9Y2E5 1009 aa3.89□□□□□ -1.79
TCOF1-208ENST00000506063 NOP58Q9Y2X3 529 aaKnown RBP3.89□□□□□ -1.79
TCOF1-208ENST00000506063 TMEM131Q92545 1883 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms