RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 GLRA2P23416 452 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 HOXA11P31270 313 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PPP2R5AQ15172 486 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 CES5AQ6NT32 575 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 LLGL2Q6P1M3 1020 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 AGMOQ6ZNB7 445 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PPFIBP1Q86W92 1011 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PRIMPOLQ96LW4 560 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 KIF2CQ99661 725 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 LRFN3Q9BTN0 628 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PHF7Q9BWX1 381 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 CSRNP2Q9H175 543 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PRMT7Q9NVM4 692 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 SSX2IPQ9Y2D8 614 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 USP15Q9Y4E8 981 aaPredicted RBP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 IPPQ9Y573 584 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 MYH11P35749 1972 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 HIDE1A8MVS5 230 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PRR33A8MZF0 331 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 H3BQV1 296 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 MED24O75448 989 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 SPATA31C1P0DKV0 1188 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 CTSAP10619 480 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 U2AF2P26368 475 aaKnown RBP eCLIP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 CCT6AP40227 531 aaKnown RBP11.54□□□□□ -0.56
NR1I3-222ENST00000506018 MBTD1Q05BQ5 628 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 ITIH3Q06033 890 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PDIA5Q14554 519 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 UBXN11Q5T124 520 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 MCTP1Q6DN14 999 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 ANKRD54Q6NXT1 300 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 SLC27A1Q6PCB7 646 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 ELMSAN1Q6PJG2 1045 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 PADI6Q6TGC4 694 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 MAEAQ7L5Y9 396 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 HSCBQ8IWL3 235 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 ASAP3Q8TDY4 903 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 CPB2Q96IY4 423 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 IFT74Q96LB3 600 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 ADPGKQ9BRR6 497 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 EMILIN2Q9BXX0 1053 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 ZBP1Q9H171 429 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 DZANK1Q9NVP4 752 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 LRWD1Q9UFC0 647 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 GIT1Q9Y2X7 761 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 IRAK3Q9Y616 596 aa11.54□□□□□ -0.56
NR1I3-222ENST00000506018 MEIS3P2A8K0S8 358 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 POMCP01189 267 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 ARF4P18085 180 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-222ENST00000506018 SLC11A1P49279 550 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 CBX2Q14781 532 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-222ENST00000506018 MAPK6Q16659 721 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 RILPL1Q5EBL4 403 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 KRT79Q5XKE5 535 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 APBB1IPQ7Z5R6 666 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-222ENST00000506018 DEPTORQ8TB45 409 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 KIFAP3Q92845 792 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 KHSRPQ92945 711 aaKnown RBP eCLIP11.53□□□□□ -0.56
NR1I3-222ENST00000506018 SNX21Q969T3 373 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 NECTIN4Q96NY8 510 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 RPS6KC1Q96S38 1066 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 DNAJB4Q9UDY4 337 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 NR2E1Q9Y466 385 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.53□□□□□ -0.56
NR1I3-222ENST00000506018 HCFC2Q9Y5Z7 792 aa11.53□□□□□ -0.56
NR1I3-222ENST00000506018 ZMYM2Q9UBW7 1377 aa11.52□□□□□ -0.56
NR1I3-222ENST00000506018 A0A1B0GUA9 196 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 ARL5CA6NH57 179 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 N4BP3O15049 544 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 CLASP2O75122 1294 aaKnown RBP11.52□□□□□ -0.57
NR1I3-222ENST00000506018 URODP06132 367 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 CYP11B2P19099 503 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 MLH1P40692 756 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 NAMPTP43490 491 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 OR1G1P47890 313 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 PTGDRQ13258 359 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 KCNC3Q14003 757 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 FAM187BQ17R55 369 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 DTHD1Q6ZMT9 781 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 ZNF280BQ86YH2 543 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 RNF135Q8IUD6 432 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 SMG8Q8ND04 991 aaKnown RBP11.52□□□□□ -0.57
NR1I3-222ENST00000506018 VN1R2Q8NFZ6 395 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 SNX29Q8TEQ0 813 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 RPGRIP1Q96KN7 1286 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 GAD1Q99259 594 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 COLEC11Q9BWP8 271 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 EIF2AQ9BY44 585 aaKnown RBP11.52□□□□□ -0.57
NR1I3-222ENST00000506018 MRPL17Q9NRX2 175 aaKnown RBP11.52□□□□□ -0.57
NR1I3-222ENST00000506018 PARP2Q9UGN5 583 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 DPP7Q9UHL4 492 aa11.52□□□□□ -0.57
NR1I3-222ENST00000506018 ARIH1Q9Y4X5 557 aaPredicted RBP11.52□□□□□ -0.57
NR1I3-222ENST00000506018 C5orf42Q9H799 3197 aa11.51□□□□□ -0.57
NR1I3-222ENST00000506018 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
NR1I3-222ENST00000506018 A0A087WWV3 80 aa11.51□□□□□ -0.57
NR1I3-222ENST00000506018 FAM86C2PA6NEL3 165 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms