RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 IPPQ9Y573 584 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 SRPRBQ9Y5M8 271 aaKnown RBP12.59□□□□□ -0.39
KDM3B-203ENST00000505756 XIRP2A4UGR9 3374 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 PHLPP2Q6ZVD8 1323 aa12.59□□□□□ -0.39
KDM3B-203ENST00000505756 PRKCBP05771 671 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 PLCG1P19174 1290 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 DNAJB1P25685 340 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 NPTX2P47972 431 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 PEX3P56589 373 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 MRPS5P82675 430 aaKnown RBP12.58□□□□□ -0.4
KDM3B-203ENST00000505756 PLCB3Q01970 1234 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 MAPK7Q13164 816 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 KARSQ15046 597 aaKnown RBP12.58□□□□□ -0.4
KDM3B-203ENST00000505756 AAK1Q2M2I8 961 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 TCEAL5Q5H9L2 206 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 SPATA32Q96LK8 384 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 KIFC3Q9BVG8 833 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 TBC1D13Q9NVG8 400 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 KANSL3Q9P2N6 904 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 LZTS1Q9Y250 596 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 INPP5FQ9Y2H2 1132 aa12.58□□□□□ -0.4
KDM3B-203ENST00000505756 A0A1W2PQ27 194 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 A0A1W2PQ64 194 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 A0A1W2PQD8 194 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 CCDC169A6NNP5 214 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 K7ERI5 159 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 N4BP3O15049 544 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 INPPL1O15357 1258 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 NCK2O43639 380 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 NPTXRO95502 500 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 MBD3O95983 291 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 TXLNAP40222 546 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 BCAR1P56945 870 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 UBE2HP62256 183 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 KRT17Q04695 432 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 RNASELQ05823 741 aaKnown RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 TMEM132AQ24JP5 1023 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 TJAP1Q5JTD0 557 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 CDR2LQ86X02 465 aaPredicted RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 SLC39A11Q8N1S5 342 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 KRI1Q8N9T8 703 aaKnown RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 MRPS27Q92552 414 aaKnown RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 PPP2R3CQ969Q6 453 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 ASB2Q96Q27 587 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 NXF3Q9H4D5 531 aaKnown RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 TMEM134Q9H6X4 195 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 KMT5AQ9NQR1 393 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 TLR9Q9NR96 1032 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 BLOC1S4Q9NUP1 217 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 SPG21Q9NZD8 308 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 CCDC39Q9UFE4 941 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 PUF60Q9UHX1 559 aaKnown RBP12.57□□□□□ -0.4
KDM3B-203ENST00000505756 GIT1Q9Y2X7 761 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 HES2Q9Y543 173 aa12.57□□□□□ -0.4
KDM3B-203ENST00000505756 ZMYM2Q9UBW7 1377 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 A0A0C4DFX4 3053 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 FAM237AA0A1B0GTK4 181 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 TTLL13PA6NNM8 815 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 SPTLC2O15270 562 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 ZC3H11AO75152 810 aaKnown RBP eCLIP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 CSPG5O95196 566 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 PLS3P13797 630 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 LIG1P18858 919 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 IRS1P35568 1242 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 PBX3P40426 434 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 MLH1P40692 756 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 AFF1P51825 1210 aaKnown RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 SMTNP53814 917 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 RAD51AP2Q09MP3 1159 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 COL19A1Q14993 1142 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 STK38Q15208 465 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 KLHL40Q2TBA0 621 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 SKOR2Q2VWA4 1001 aaPredicted RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 ARSHQ5FYA8 562 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 SPECC1Q5M775 1068 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 AXDND1Q5T1B0 1012 aaPredicted RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 PDE12Q6L8Q7 609 aaKnown RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 USP49Q70CQ1 688 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 GPBP1Q86WP2 473 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 LRRC15Q8TF66 581 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 LARP4BQ92615 738 aaKnown RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 RAD54LQ92698 747 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 SYMPKQ92797 1274 aaKnown RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 CLIC6Q96NY7 704 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 ADPGKQ9BRR6 497 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 NTPCRQ9BSD7 190 aaKnown RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 RNF39Q9H2S5 420 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 NRDE2Q9H7Z3 1164 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 UBE2ZQ9H832 354 aaPredicted RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 LARSQ9P2J5 1176 aaKnown RBP12.56□□□□□ -0.4
KDM3B-203ENST00000505756 ARHGAP28Q9P2N2 729 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 ODF2LQ9ULJ1 636 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 PLXNA4Q9HCM2 1894 aa12.56□□□□□ -0.4
KDM3B-203ENST00000505756 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.55□□□□□ -0.4
KDM3B-203ENST00000505756 ARL5CA6NH57 179 aa12.55□□□□□ -0.4
KDM3B-203ENST00000505756 SFI1A8K8P3 1242 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms