RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 IMPACTQ9P2X3 320 aa4.76□□□□□ -1.65
TRAPPC13-208ENST00000505553 GTF2A1LQ9UNN4 478 aa4.76□□□□□ -1.65
TRAPPC13-208ENST00000505553 LRCH1Q9Y2L9 728 aa4.76□□□□□ -1.65
TRAPPC13-208ENST00000505553 TELO2Q9Y4R8 837 aa4.76□□□□□ -1.65
TRAPPC13-208ENST00000505553 PCDHGB6Q9Y5F9 930 aa4.76□□□□□ -1.65
TRAPPC13-208ENST00000505553 RASA4BC9J798 803 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 RASA4O43374 803 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 NBNO60934 754 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 WASP42768 502 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCT5P48643 541 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 AGFG1P52594 562 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 GPSM2P81274 684 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 PAN2Q504Q3 1202 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRR16Q569H4 304 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZBTB41Q5SVQ8 909 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 THEMIS2Q5TEJ8 643 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRAMEF9Q5VWM5 478 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 PPP4R3AQ6IN85 833 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCDC70Q6NSX1 233 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 KLHDC10Q6PID8 442 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZC3H14Q6PJT7 736 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 SAPCD2Q86UD0 394 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 RTN4RL1Q86UN2 441 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 RBM12BQ8IXT5 1001 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 TTC9BQ8N6N2 239 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 TTLL11Q8NHH1 800 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 POF1BQ8WVV4 589 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 CLEC4DQ8WXI8 215 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 LRTOMTQ8WZ04 291 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 RPGRQ92834 1020 aaKnown RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 HDAC10Q969S8 669 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 FOXRED1Q96CU9 486 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 CGRRF1Q99675 332 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 FOXB1Q99853 325 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 BHMT2Q9H2M3 363 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 TNFRSF12AQ9NP84 129 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 NUDT5Q9UKK9 219 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 POLHQ9Y253 713 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 PCDHA5Q9Y5H7 936 aa4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 MORC2Q9Y6X9 1032 aaPredicted RBP4.75□□□□□ -1.65
TRAPPC13-208ENST00000505553 hCG_1642624A0A1W2PR95 340 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCDC154A6NI56 674 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 HTRA2O43464 458 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 SLPIP03973 132 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 ALDH2P05091 517 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 PFKMP08237 780 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 PFKLP17858 780 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 RPL17P18621 184 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 TACR1P25103 407 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 ECE1P42892 770 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 MAPKAPK2P49137 400 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 NCKAP1LP55160 1127 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 CDK17Q00537 523 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 SLC6A3Q01959 620 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 MVKQ03426 396 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 MALLQ13021 153 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 BIRC3Q13489 604 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 POLD3Q15054 466 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 CNN3Q15417 329 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 SLFN12LQ6IEE8 588 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 RPTNQ6XPR3 784 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 KANSL1Q7Z3B3 1105 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 SPATA5Q8NB90 893 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 CALML6Q8TD86 181 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 TSPEARQ8WU66 669 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 TRIM63Q969Q1 353 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 PAWRQ96IZ0 340 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 SENP7Q9BQF6 1050 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 RSAD1Q9HA92 442 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZNF69Q9UC07 566 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRSS50Q9UI38 385 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 TMPRSS11EQ9UL52 423 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 LZTS1Q9Y250 596 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 STXBP5LQ9Y2K9 1186 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 CFAP20Q9Y6A4 193 aaKnown RBP4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 MYPNQ86TC9 1320 aa4.74□□□□□ -1.65
TRAPPC13-208ENST00000505553 TCRBV5S2A0A599 114 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRAMEF22A3QJZ6 481 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 ACOT7O00154 380 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 FOXN3O00409 490 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 SLC16A6O15403 523 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 PIP5K1CO60331 668 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRLP01236 227 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 CENPBP07199 599 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 FAHP16930 419 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 ZNF20P17024 532 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 AOAHP28039 575 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 SARSP49591 514 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 GPR15P49685 360 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 FXR1P51114 621 aaKnown RBP eCLIP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 MYBPC3Q14896 1274 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 TARBP2Q15633 366 aaKnown RBP4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCDC157Q569K6 752 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 CCDC178Q5BJE1 867 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 MUM1L1Q5H9M0 696 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 DGKKQ5KSL6 1271 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 PRAMEF18Q5VWM3 479 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 BICRALQ6AI39 1079 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 FAM180AQ6UWF9 173 aa4.73□□□□□ -1.65
TRAPPC13-208ENST00000505553 MAEAQ7L5Y9 396 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms