RNA–Protein interactions for RNA: ENST00000505522.4

SNHG4-202, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-202ENST00000505522 MARCH5Q9NX47 278 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 MIOSQ9NXC5 875 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 PPP4R2Q9NY27 417 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 HES2Q9Y543 173 aa13.59□□□□□ -0.23
SNHG4-202ENST00000505522 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 F8W810 466 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 INO80B-WBP1J3KQ70 363 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 NEMFO60524 1076 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 DGAT1O75907 488 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 BRD1O95696 1058 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 ASGR2P07307 311 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 CNPP09543 421 aaKnown RBP13.58□□□□□ -0.24
SNHG4-202ENST00000505522 GLRA2P23416 452 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 AXLP30530 894 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 MLH1P40692 756 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 CLCN4P51793 760 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 NEK4P51957 841 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 POU5F1BQ06416 359 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 TFDP1Q14186 410 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNHG4-202ENST00000505522 AMHR2Q16671 573 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 ATAT1Q5SQI0 421 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 NOTUMQ6P988 496 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 CABP7Q86V35 215 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 PPFIBP1Q86W92 1011 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
SNHG4-202ENST00000505522 COLGALT2Q8IYK4 626 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 CNNM3Q8NE01 707 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 ZFP42Q96MM3 310 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 GAD1Q99259 594 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 CSRNP2Q9H175 543 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 TMEM60Q9H2L4 133 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 UBN1Q9NPG3 1134 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 DBR1Q9UK59 544 aaKnown RBP13.58□□□□□ -0.24
SNHG4-202ENST00000505522 SORCS3Q9UPU3 1222 aa13.58□□□□□ -0.24
SNHG4-202ENST00000505522 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
SNHG4-202ENST00000505522 POTEMA6NI47 508 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 C2CD2LO14523 706 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 INPPL1O15357 1258 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 B4GALT5O43286 388 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 EFEMP2O95967 443 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 ARF4P18085 180 aaPredicted RBP13.57□□□□□ -0.24
SNHG4-202ENST00000505522 KLRC2P26717 231 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 AVPR2P30518 371 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 OR1G1P47890 313 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 RARRES1P49788 294 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 SCNN1GP51170 649 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 DSC1Q08554 894 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 TCF15Q12870 199 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 TRIM29Q14134 588 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
SNHG4-202ENST00000505522 ZDHHC14Q8IZN3 488 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 TDRD5Q8NAT2 981 aaKnown RBP13.57□□□□□ -0.24
SNHG4-202ENST00000505522 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 HERC2P3Q9BVR0 1158 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 APOL6Q9BWW8 343 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 EMILIN2Q9BXX0 1053 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 POLR3FQ9H1D9 316 aaPredicted RBP13.57□□□□□ -0.24
SNHG4-202ENST00000505522 NXF3Q9H4D5 531 aaKnown RBP13.57□□□□□ -0.24
SNHG4-202ENST00000505522 MRPL17Q9NRX2 175 aaKnown RBP13.57□□□□□ -0.24
SNHG4-202ENST00000505522 STK39Q9UEW8 545 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 LIMD1Q9UGP4 676 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 DENND4AQ7Z401 1863 aa13.57□□□□□ -0.24
SNHG4-202ENST00000505522 USO1O60763 962 aaKnown RBP13.56□□□□□ -0.24
SNHG4-202ENST00000505522 SEC24BO95487 1268 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 SOD2P04179 222 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 SPATA31C1P0DKV0 1188 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 MCM7P33993 719 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 PTPN5P54829 565 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 GUCY1B3Q02153 619 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
SNHG4-202ENST00000505522 MTMR3Q13615 1198 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 MAEAQ7L5Y9 396 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 GPR149Q86SP6 731 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 UBALD2Q8IYN6 164 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 RNF168Q8IYW5 571 aaPredicted RBP13.56□□□□□ -0.24
SNHG4-202ENST00000505522 CCDC43Q96MW1 224 aaKnown RBP13.56□□□□□ -0.24
SNHG4-202ENST00000505522 RPS6KC1Q96S38 1066 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 NFKBIZQ9BYH8 718 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 SFXN1Q9H9B4 322 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 GPRC5CQ9NQ84 441 aa13.56□□□□□ -0.24
SNHG4-202ENST00000505522 SPDYE4A6NLX3 237 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 MED24O75448 989 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 NPTXRO95502 500 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 URODP06132 367 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 AKAP5P24588 427 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 KIAA0319Q5VV43 1072 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 CATSPER3Q86XQ3 398 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 GSTCDQ8NEC7 633 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 PRRX2Q99811 253 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 TRIM6Q9C030 488 aaPredicted RBP13.55□□□□□ -0.24
SNHG4-202ENST00000505522 USTQ9Y2C2 406 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 GIT1Q9Y2X7 761 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 PLXNA3P51805 1871 aa13.55□□□□□ -0.24
SNHG4-202ENST00000505522 TDRD15B5MCY1 1934 aaKnown RBP13.54□□□□□ -0.24
SNHG4-202ENST00000505522 C2orf16Q68DN1 1984 aa13.54□□□□□ -0.24
SNHG4-202ENST00000505522 MYO10Q9HD67 2058 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms