RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 CFAP100Q494V2 611 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 GAGE13Q4V321 117 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZNF483Q8TF39 744 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 RNPC3Q96LT9 517 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 KANK1Q14678 1352 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 ATP10AO60312 1499 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 VWDEQ8N2E2 1590 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 PPRC1Q5VV67 1664 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 RNF17Q9BXT8 1623 aaKnown RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 PRDM15P57071 1507 aaPredicted RBP6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 XDHP47989 1333 aa6.76□□□□□ -1.33
DEPDC1B-203ENST00000505017 A2MP01023 1474 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZNF891A8MT65 544 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 GRXCR1A8MXD5 290 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 TGM5O43548 720 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 OPHN1O60890 802 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 PTTG1IPP53801 180 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 BCAR1P56945 870 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 DSG1Q02413 1049 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 ADCY2Q08462 1091 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 HTR3DQ70Z44 454 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 ELOA2Q8IYF1 753 aaPredicted RBP6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 ANKRD35Q8N283 1001 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 PPP1R14CQ8TAE6 165 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 CLIP3Q96DZ5 547 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 SIN3AQ96ST3 1273 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 CEP89Q96ST8 783 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 CD2APQ9Y5K6 639 aa6.75□□□□□ -1.33
DEPDC1B-203ENST00000505017 TET3O43151 1660 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 REREQ9P2R6 1566 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 LCHNA4D1U4 455 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 F2P00734 622 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 CFBP00751 764 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 KIR2DL3P43628 341 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 SMAD3P84022 425 aaKnown RBP6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 CRHR2Q13324 411 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 KRTAP15-1Q3LI76 137 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 KIAA1841Q6NSI8 718 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 NME9Q86XW9 330 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 MRFAP1L1Q96HT8 127 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZNF496Q96IT1 587 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 TCF25Q9BQ70 676 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 KRTAP9-8Q9BYQ0 159 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 ENKD1Q9H0I2 346 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 TOMM22Q9NS69 142 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 MAGEC2Q9UBF1 373 aaPredicted RBP6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 LMTK2Q8IWU2 1503 aa6.74□□□□□ -1.33
DEPDC1B-203ENST00000505017 ABCA6Q8N139 1617 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 CYP27B1O15528 508 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 NR4A1P22736 598 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 UBE2R2Q712K3 238 aaPredicted RBP6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 PHYKPLQ8IUZ5 450 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 CHTF18Q8WVB6 975 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZNF512Q96ME7 567 aaPredicted RBP6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 AGAP2Q99490 1192 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 MS4A5Q9H3V2 200 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 INTS7Q9NVH2 962 aaKnown RBP6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 PARPBPQ9NWS1 579 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 FRMPD1Q5SYB0 1578 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 DIP2CQ9Y2E4 1556 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 TSPOAP1O95153 1857 aa6.73□□□□□ -1.33
DEPDC1B-203ENST00000505017 MROH1Q8NDA8 1641 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 GOLGA8BA8MQT2 603 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 KPNA6O60684 536 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 APOL3O95236 402 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 GAAP10253 952 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 POU3F2P20265 443 aaPredicted RBP6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 MAN2A2P49641 1150 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 COL10A1Q03692 680 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZBTB41Q5SVQ8 909 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 PIK3C3Q8NEB9 887 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 GPR87Q9BY21 358 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 OSBPL6Q9BZF3 934 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 ING3Q9NXR8 418 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 C11orf21Q9P2W6 132 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 TRPS1Q9UHF7 1281 aa6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 WDR33Q9C0J8 1336 aaKnown RBP6.72□□□□□ -1.33
DEPDC1B-203ENST00000505017 ZC3H13Q5T200 1668 aaKnown RBP6.71□□□□□ -1.33
DEPDC1B-203ENST00000505017 NEURL4Q96JN8 1562 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 CCDC144AA2RUR9 1427 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 FAM20BO75063 409 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 JUNP05412 331 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 MAKP20794 623 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 ADCY1Q08828 1119 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 PCBP1Q15365 356 aaKnown RBP eCLIP6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 FAM214AQ32MH5 1076 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 RPUSD2Q8IZ73 545 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 CMTM4Q8IZR5 234 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 C7orf31Q8N865 590 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 RPGRQ92834 1020 aaKnown RBP6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 PGBD4Q96DM1 585 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 MNTQ99583 582 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 FDXACB1Q9BRP7 624 aaPredicted RBP6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 TRPM2O94759 1503 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 AGLP35573 1532 aa6.71□□□□□ -1.34
DEPDC1B-203ENST00000505017 SPHKAPQ2M3C7 1700 aa6.7□□□□□ -1.34
DEPDC1B-203ENST00000505017 PTPRTO14522 1441 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms