RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 C8orf74Q6P047 294 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 SLC35G2Q8TBE7 412 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 RFFLQ8WZ73 363 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 SPATC1LQ9H0A9 340 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 ELP3Q9H9T3 547 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 TOPORSQ9NS56 1045 aaPredicted RBP24.34■■□□□ 1.49
PCDH1-204ENST00000503492 SOWAHBA6NEL2 793 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 HNRNPDLO14979 420 aaKnown RBP24.33■■□□□ 1.49
PCDH1-204ENST00000503492 TMC2Q8TDI7 906 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 KREMEN1Q96MU8 473 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 GDAP1L1Q96MZ0 367 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 TMEM8AQ9HCN3 771 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 STIM2Q9P246 746 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 COQ4Q9Y3A0 265 aa24.33■■□□□ 1.49
PCDH1-204ENST00000503492 OATP04181 439 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 CYP24A1Q07973 514 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 BRDTQ58F21 947 aaPredicted RBP24.32■■□□□ 1.48
PCDH1-204ENST00000503492 PEX26Q7Z412 305 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 USP38Q8NB14 1042 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 AENQ8WTP8 325 aaKnown RBP24.32■■□□□ 1.48
PCDH1-204ENST00000503492 CTNNBL1Q8WYA6 563 aaPredicted RBP24.32■■□□□ 1.48
PCDH1-204ENST00000503492 ARHGEF26Q96DR7 871 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 PBKQ96KB5 322 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 POLGP54098 1239 aaPredicted RBP24.32■■□□□ 1.48
PCDH1-204ENST00000503492 GPS2Q13227 327 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 GLE1Q53GS7 698 aaKnown RBP24.32■■□□□ 1.48
PCDH1-204ENST00000503492 DAAM2Q86T65 1068 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 NT5DC3Q86UY8 548 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 NCAPG2Q86XI2 1143 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 GPD1LQ8N335 351 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 OTUD5Q96G74 571 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 CLMNQ96JQ2 1002 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 SELENOOQ9BVL4 669 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 RNF181Q9P0P0 153 aa24.32■■□□□ 1.48
PCDH1-204ENST00000503492 A0A0G2JLL6 359 aaPredicted RBP24.31■■□□□ 1.48
PCDH1-204ENST00000503492 GARTP22102 1010 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 UBA1P22314 1058 aaKnown RBP24.31■■□□□ 1.48
PCDH1-204ENST00000503492 EDNRBP24530 442 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 PRRT2Q7Z6L0 340 aaPredicted RBP24.31■■□□□ 1.48
PCDH1-204ENST00000503492 SYCE1Q8N0S2 351 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 METTL13Q8N6R0 699 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 TMEM143Q96AN5 459 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 THAP2Q9H0W7 228 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 R3HDMLQ9H3Y0 253 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 VIPAS39Q9H9C1 493 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 SUCLA2Q9P2R7 463 aaPredicted RBP24.31■■□□□ 1.48
PCDH1-204ENST00000503492 IGKV6D-21A0A0A0MT36 114 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 FAM71AQ8IYT1 594 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 PPM1KQ8N3J5 372 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 BICD1Q96G01 975 aa24.31■■□□□ 1.48
PCDH1-204ENST00000503492 ANKRD62A6NC57 917 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 BUB1BO60566 1050 aaPredicted RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 SGPL1O95470 568 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 USP8P40818 1118 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 IREB2P48200 963 aaKnown RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 GPC3P51654 580 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 PPATQ06203 517 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 PROCA1Q8NCQ7 364 aaPredicted RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 TAS1R2Q8TE23 839 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 PAGR1Q9BTK6 254 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 DHX33Q9H6R0 707 aaKnown RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 TMEM59LQ9UK28 342 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 HPCAL4Q9UM19 191 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 GSTTP1A0A1W2PQM5 241 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 IRX3P78415 501 aaPredicted RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 MOB2Q70IA6 237 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 RPUSD2Q8IZ73 545 aaKnown RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 HELQQ8TDG4 1101 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 ASAP3Q8TDY4 903 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 CEP89Q96ST8 783 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 PCYT2Q99447 389 aa24.3■■□□□ 1.48
PCDH1-204ENST00000503492 FHDC1Q9C0D6 1143 aaPredicted RBP24.3■■□□□ 1.48
PCDH1-204ENST00000503492 H0YCG3 227 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 CEP104O60308 925 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 CNMDO75829 334 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 FARP2O94887 1054 aaPredicted RBP24.29■■□□□ 1.48
PCDH1-204ENST00000503492 FBXL13Q8NEE6 735 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 KRT12Q99456 494 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 FAM213AQ9BRX8 229 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 CHRNB2P17787 502 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 GTF2H1P32780 548 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 SV2AQ7L0J3 742 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 ACTRT1Q8TDG2 376 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 EPS8L1Q8TE68 723 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 SHC3Q92529 594 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 HES6Q96HZ4 224 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 ASCC2Q9H1I8 757 aaPredicted RBP24.29■■□□□ 1.48
PCDH1-204ENST00000503492 PORCNQ9H237 461 aa24.29■■□□□ 1.48
PCDH1-204ENST00000503492 NOCTQ9UK39 431 aaKnown RBP24.29■■□□□ 1.48
PCDH1-204ENST00000503492 ZC3H4Q9UPT8 1303 aaKnown RBP24.28■■□□□ 1.48
PCDH1-204ENST00000503492 GLI1P08151 1106 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 DLATP10515 647 aaKnown RBP24.28■■□□□ 1.48
PCDH1-204ENST00000503492 GLRA2P23416 452 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 MFAP3P55082 362 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 NOP9Q86U38 636 aaKnown RBP24.28■■□□□ 1.48
PCDH1-204ENST00000503492 ERO1BQ86YB8 467 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 ELMO3Q96BJ8 720 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 PCDHB18PQ96TA0 734 aa24.28■■□□□ 1.48
PCDH1-204ENST00000503492 NIFKQ9BYG3 293 aaKnown RBP24.28■■□□□ 1.48
PCDH1-204ENST00000503492 ISCUQ9H1K1 167 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms