RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 USP38Q8NB14 1042 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 RNF214Q8ND24 703 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 EEF2KMTQ96G04 330 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 CGNQ9P2M7 1197 aaKnown RBP22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 ST3GAL5Q9UNP4 418 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 GPR182O15218 404 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 TOM1L1O75674 476 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 HOXA11P31270 313 aaPredicted RBP22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 CYP2C18P33260 490 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 MYL5Q02045 173 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 SPATA1Q5VX52 437 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 LUZP1Q86V48 1076 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 CDR2LQ86X02 465 aaPredicted RBP22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 CBWD1Q9BRT8 395 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 AGPAT5Q9NUQ2 364 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 PADI3Q9ULW8 664 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 TNFSF13BQ9Y275 285 aa22.33■■□□□ 1.16
CDC42SE2-206ENST00000503291 A0A1B0GUA9 196 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 NR3C1P04150 777 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 CD52P31358 61 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 CCL23P55773 120 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 FKBP3Q00688 224 aaKnown RBP22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 NCAPHQ15003 741 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 CSGALNACT2Q8N6G5 542 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 TCHPQ9BT92 498 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 WNT8AQ9H1J5 351 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 PTPRHQ9HD43 1115 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 PRDM5Q9NQX1 630 aaPredicted RBP22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 NFE2L3Q9Y4A8 694 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 STYXL1Q9Y6J8 313 aa22.32■■□□□ 1.16
CDC42SE2-206ENST00000503291 BECN2A8MW95 431 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 IKBKBO14920 756 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 CLDN3O15551 220 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 ADAM9Q13443 819 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 GPNMBQ14956 572 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 TPD52L1Q16890 204 aaPredicted RBP22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 SLFN12LQ6IEE8 588 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 ARMCX5Q6P1M9 558 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 POMGNT1Q8WZA1 660 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 PCIF1Q9H4Z3 704 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 ANKFY1Q9P2R3 1169 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 TRIM43BA6NCK2 446 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 SMTNL1A8MU46 457 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 PROZP22891 400 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 NR2F2P24468 414 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 AXLP30530 894 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 PAK2Q13177 524 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 NFIL3Q16649 462 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 EEF1DP3Q658K8 133 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 TRIM43Q96BQ3 446 aaPredicted RBP22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 SCLYQ96I15 445 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 SRRTQ9BXP5 876 aaKnown RBP22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 HAPLN2Q9GZV7 340 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 RBSNQ9H1K0 784 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 ERVK-5Q9HDB9 667 aa22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 PIN4Q9Y237 131 aaKnown RBP22.31■■□□□ 1.16
CDC42SE2-206ENST00000503291 KIAA0355O15063 1070 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 NBNO60934 754 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 GARTP22102 1010 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 RPL13P26373 211 aaKnown RBP22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 MATR3P43243 847 aaKnown RBP eCLIP22.3■■□□□ 1.163e-6■■■■□ 23.9
CDC42SE2-206ENST00000503291 SLC9A9Q8IVB4 645 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 C12orf56Q8IXR9 622 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 PDZD7Q9H5P4 517 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 DMAC2Q9NW81 257 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 A0A0B4J269 797 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 ABLIM1O14639 778 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 CYP2J2P51589 502 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 NOTUMQ6P988 496 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 MPZL3Q6UWV2 235 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 ZBTB33Q86T24 672 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 TMEM174Q8WUU8 243 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 SAMSN1Q9NSI8 373 aaKnown RBP22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 FANCLQ9NW38 375 aa22.3■■□□□ 1.16
CDC42SE2-206ENST00000503291 TIMP1P01033 207 aa22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 ITGB8P26012 769 aa22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 MYBPC2Q14324 1141 aa22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 ZNF568Q3ZCX4 644 aa22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 LRRC55Q6ZSA7 311 aa22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 ZC3H3Q8IXZ2 948 aaKnown RBP22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 IFIH1Q9BYX4 1025 aaKnown RBP22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 HSPBP1Q9NZL4 362 aa22.29■■□□□ 1.16
CDC42SE2-206ENST00000503291 N4BP3O15049 544 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 CETN3O15182 167 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 PARNO95453 639 aaKnown RBP22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 MCL1Q07820 350 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 MSTO1Q9BUK6 570 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 HTATIP2Q9BUP3 242 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 ALPK3Q96L96 1907 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 HARSP12081 509 aaKnown RBP22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 RAG1P15918 1043 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 XXYLT1Q8NBI6 393 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 ZSWIM2Q8NEG5 633 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 CHST12Q9NRB3 414 aa22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 AGO2Q9UKV8 859 aaKnown RBP22.28■■□□□ 1.16
CDC42SE2-206ENST00000503291 GOLGA6L19H0YKK7 550 aa22.27■■□□□ 1.16
CDC42SE2-206ENST00000503291 EXOC3O60645 756 aa22.27■■□□□ 1.16
CDC42SE2-206ENST00000503291 FGFR1OPO95684 399 aaKnown RBP22.27■■□□□ 1.16
CDC42SE2-206ENST00000503291 CASP4P49662 377 aa22.27■■□□□ 1.16
CDC42SE2-206ENST00000503291 NOLC1Q14978 699 aaKnown RBP eCLIP22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms