RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 IFIH1Q9BYX4 1025 aaKnown RBP23.91■■□□□ 1.42
PTPN13-205ENST00000502971 APEX2Q9UBZ4 518 aa23.91■■□□□ 1.42
PTPN13-205ENST00000502971 GUCA1BQ9UMX6 200 aa23.91■■□□□ 1.42
PTPN13-205ENST00000502971 CA12O43570 354 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 URI1O94763 535 aaPredicted RBP23.9■■□□□ 1.42
PTPN13-205ENST00000502971 LGALS2P05162 132 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 ANXA13P27216 316 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 GTF2H1P32780 548 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 PRKCIP41743 596 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 STAT1P42224 750 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 KIF5AQ12840 1032 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 IRF5Q13568 498 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 ACVR2BQ13705 512 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 EPC2Q52LR7 807 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 ZNF484Q5JVG2 852 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 MORN1Q5T089 497 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 PARD3BQ8TEW8 1205 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 VTI1AQ96AJ9 217 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 USP20Q9Y2K6 914 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 EXTL3O43909 919 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 SLU7O95391 586 aaKnown RBP23.9■■□□□ 1.42
PTPN13-205ENST00000502971 FERP16591 822 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 GCLMP48507 274 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 CYP24A1Q07973 514 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 MKRN4PQ13434 485 aaPredicted RBP23.9■■□□□ 1.42
PTPN13-205ENST00000502971 DRP2Q13474 957 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 DUSP28Q4G0W2 176 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 ZIC5Q96T25 663 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 TMEM117Q9H0C3 514 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 SUGCTQ9HAC7 445 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 LUC7LQ9NQ29 371 aaKnown RBP23.9■■□□□ 1.42
PTPN13-205ENST00000502971 DNAJC12Q9UKB3 198 aa23.9■■□□□ 1.42
PTPN13-205ENST00000502971 ZNF233A6NK53 670 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 PPFIA4O75335 1185 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 MAGEA1P43355 309 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 MXI1P50539 228 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 ARID5AQ03989 594 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 LAMTOR4Q0VGL1 99 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 MAP2K5Q13163 448 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 GJC2Q5T442 439 aaPredicted RBP23.89■■□□□ 1.41
PTPN13-205ENST00000502971 CDCA2Q69YH5 1023 aaPredicted RBP23.89■■□□□ 1.41
PTPN13-205ENST00000502971 GJB7Q6PEY0 223 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 C17orf99Q6UX52 265 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 SLC35F6Q8N357 371 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 AFG1LQ8WV93 481 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 C2orf40Q9H1Z8 148 aa23.89■■□□□ 1.41
PTPN13-205ENST00000502971 AJAP1Q9UKB5 411 aaPredicted RBP23.89■■□□□ 1.41
PTPN13-205ENST00000502971 RCCD1A6NED2 376 aa23.88■■□□□ 1.41
PTPN13-205ENST00000502971 LDHAP00338 332 aaKnown RBP23.88■■□□□ 1.41
PTPN13-205ENST00000502971 GFPT1Q06210 699 aaPredicted RBP23.88■■□□□ 1.41
PTPN13-205ENST00000502971 SLC18A3Q16572 532 aa23.88■■□□□ 1.41
PTPN13-205ENST00000502971 LACRTQ9GZZ8 138 aa23.88■■□□□ 1.41
PTPN13-205ENST00000502971 TMEM8AQ9HCN3 771 aa23.88■■□□□ 1.41
PTPN13-205ENST00000502971 TRIM10Q9UDY6 481 aa23.88■■□□□ 1.41
PTPN13-205ENST00000502971 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.87■■□□□ 1.41
PTPN13-205ENST00000502971 CTAGE9A4FU28 777 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 LRRIQ3A6PVS8 624 aaPredicted RBP23.87■■□□□ 1.41
PTPN13-205ENST00000502971 ASAP2O43150 1006 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 PJA2O43164 708 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 SMPD1P17405 629 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 SOX5P35711 763 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 TUBB2AQ13885 445 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 KRT39Q6A163 491 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 ZPBP2Q6X784 338 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 GPIHBP1Q8IV16 184 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 ZBTB8OSQ8IWT0 167 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 FAM213AQ9BRX8 229 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 TUBB2BQ9BVA1 445 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 RNPEPQ9H4A4 650 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 SUCLA2Q9P2R7 463 aaPredicted RBP23.87■■□□□ 1.41
PTPN13-205ENST00000502971 AGO2Q9UKV8 859 aaKnown RBP23.87■■□□□ 1.41
PTPN13-205ENST00000502971 F8VZ95 297 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 AOC2O75106 756 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 HOXC6P09630 235 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 CCDC172P0C7W6 258 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 TFDP1Q14186 410 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 LRRC71Q8N4P6 559 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 CCDC127Q96BQ5 260 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 ERO1AQ96HE7 468 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 NAPGQ99747 312 aaPredicted RBP23.87■■□□□ 1.41
PTPN13-205ENST00000502971 CCDC113Q9H0I3 377 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 ZHX1Q9UKY1 873 aaPredicted RBP23.87■■□□□ 1.41
PTPN13-205ENST00000502971 COQ4Q9Y3A0 265 aa23.87■■□□□ 1.41
PTPN13-205ENST00000502971 COL1A2P08123 1366 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 CEP350Q5VT06 3117 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 MAGEB2O15479 319 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 HOXD8P13378 290 aaPredicted RBP23.86■■□□□ 1.41
PTPN13-205ENST00000502971 CRHR2Q13324 411 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 DRAP1Q14919 205 aaPredicted RBP23.86■■□□□ 1.41
PTPN13-205ENST00000502971 C10orf76Q5T2E6 689 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 PHLDB3Q6NSJ2 640 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.86■■□□□ 1.41
PTPN13-205ENST00000502971 TARS2Q9BW92 718 aaKnown RBP23.86■■□□□ 1.41
PTPN13-205ENST00000502971 ZNF215Q9UL58 517 aaPredicted RBP23.86■■□□□ 1.41
PTPN13-205ENST00000502971 TFR2Q9UP52 801 aa23.86■■□□□ 1.41
PTPN13-205ENST00000502971 C22orf31O95567 290 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 PTK2Q05397 1052 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 PSMD6Q15008 389 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 EFCAB12Q6NXP0 572 aa23.85■■□□□ 1.41
PTPN13-205ENST00000502971 RNF149Q8NC42 400 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms