RNA–Protein interactions for RNA: ENST00000502840.5

CDC42SE2-205, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-205ENST00000502840 A2MP01023 1474 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 SHANK2Q9UPX8 1470 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 MATN3O15232 486 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 TSPAN6O43657 245 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 KDM1AO60341 852 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CUTAO60888 179 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 SCGB1D2O95969 90 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 PRLP01236 227 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 RBP3P10745 1247 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 TNFRSF1AP19438 455 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CD40P25942 277 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 RAB27AP51159 221 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 MANFP55145 182 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 RIPK4P57078 832 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 IL13RA1P78552 427 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 EXOSC9Q06265 439 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 ITKQ08881 620 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 PIN1Q13526 163 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 STILQ15468 1287 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CDSNQ15517 529 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 ZKSCAN2Q63HK3 967 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 KANSL1Q7Z3B3 1105 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CXorf67Q86X51 503 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CIR1Q86X95 450 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 ITPRIPQ8IWB1 547 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 WDR63Q8IWG1 891 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 ZZZ3Q8IYH5 903 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CHST13Q8NET6 341 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 DVL3Q92997 716 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 TSR2Q969E8 191 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CHMP4CQ96CF2 233 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 HOOK2Q96ED9 719 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 AHCYL2Q96HN2 611 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CAMKK2Q96RR4 588 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 AMNQ9BXJ7 453 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 SEC61A2Q9H9S3 476 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 TCF7L1Q9HCS4 588 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 JADE2Q9NQC1 790 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 INCENPQ9NQS7 918 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 SMC4Q9NTJ3 1288 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 CCM2LQ9NUG4 571 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 GALNT8Q9NY28 637 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 PPP2R3BQ9Y5P8 575 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 DUOX2Q9NRD8 1548 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 ARHGEF12Q9NZN5 1544 aa3.8□□□□□ -1.8
CDC42SE2-205ENST00000502840 PLA2R1Q13018 1463 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 SCAF11Q99590 1463 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 PLEKHH1Q9ULM0 1364 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 CGNL1Q0VF96 1302 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 PATE3B3GLJ2 98 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 GOLGA6L22H0YM25 854 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 OVOL3O00110 214 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 IPO8O15397 1037 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 PRPF3O43395 683 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 ZRANB2O95218 330 aaKnown RBP eCLIP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 ETV4P43268 484 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 MTNR1BP49286 362 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 RARSP54136 660 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 FAPQ12884 760 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 PUM1Q14671 1186 aaKnown RBP eCLIP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 USP10Q14694 798 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 ODF1Q14990 250 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 PCBP2Q15366 365 aaKnown RBP eCLIP3.79□□□□□ -1.82e-6■■■■■ 27.5
CDC42SE2-205ENST00000502840 TMEM240Q5SV17 173 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 DPP8Q6V1X1 898 aaPredicted RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 KCNK18Q7Z418 384 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 NME9Q86XW9 330 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 IFNL2Q8IZJ0 200 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 NGEFQ8N5V2 710 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 HIPK4Q8NE63 616 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 ERCC4Q92889 916 aaPredicted RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 FUBP3Q96I24 572 aaKnown RBP eCLIP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 WWC2-AS2Q96NR7 200 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 GBP4Q96PP9 640 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 HAPLN2Q9GZV7 340 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 C14orf93Q9H972 538 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 ZNF277Q9NRM2 450 aaPredicted RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 TERF2IPQ9NYB0 399 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 NOB1Q9ULX3 412 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 TNNQ9UQP3 1299 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 ASB1Q9Y576 335 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 SAMD9LQ8IVG5 1584 aa3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.79□□□□□ -1.8
CDC42SE2-205ENST00000502840 CDC42BPAQ5VT25 1732 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 RPGRIP1LQ68CZ1 1315 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 ARHGEF5Q12774 1597 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 UBA6A0AVT1 1052 aaPredicted RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 EIF5BO60841 1220 aaKnown RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 MAFO75444 373 aaPredicted RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 FRAT2O75474 233 aaPredicted RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 MT-CO1P00395 513 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 HSP90AA1P07900 732 aaKnown RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 HMOX1P09601 288 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 ALDH6A1Q02252 535 aaKnown RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 R3HDM1Q15032 1099 aaKnown RBP3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 PITRM1Q5JRX3 1037 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 KANK2Q63ZY3 851 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 TMEM200BQ69YZ2 307 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 CYB5RLQ6IPT4 315 aa3.78□□□□□ -1.8
CDC42SE2-205ENST00000502840 LRSAM1Q6UWE0 723 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms