RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	KSR1	Q8IVT5	923 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	THNSL1	Q8IYQ7	743 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	LRRC43	Q8N309	656 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	RNF149	Q8NC42	400 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	SNX29	Q8TEQ0	813 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	PIGO	Q8TEQ8	1089 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	ATXN2L	Q8WWM7	1075 aa	Known RBP	11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	MTMR9	Q96QG7	549 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	PLVAP	Q9BX97	442 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	DHX33	Q9H6R0	707 aa	Known RBP	11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	TUFT1	Q9NNX1	390 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	ANKEF1	Q9NU02	776 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	LRWD1	Q9UFC0	647 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	COG5	Q9UP83	839 aa		11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	TDRD15	B5MCY1	1934 aa	Known RBP	11.85	□□□□□ -0.51
CDK11A-222	ENST00000498810	INO80B-WBP1	J3KQ70	363 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LAD1	O00515	517 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	ASAP2	O43150	1006 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LPXN	O60711	386 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	SLITRK3	O94933	977 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	STBD1	O95210	358 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LAG3	P18627	525 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	POU3F3	P20264	500 aa	Predicted RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	U2AF2	P26368	475 aa	Known RBP eCLIP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	CA8	P35219	290 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	RAB27A	P51159	221 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LAMTOR4	Q0VGL1	99 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	ZRSR1	Q15695	479 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	C4orf48	Q5BLP8	95 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	RILPL1	Q5EBL4	403 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	FAM102B	Q5T8I3	360 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	KRT79	Q5XKE5	535 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LARP1B	Q659C4	914 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	MAEA	Q7L5Y9	396 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	SRGAP1	Q7Z6B7	1085 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	FERMT3	Q86UX7	667 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	FAM174A	Q8TBP5	190 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	PRPF31	Q8WWY3	499 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	ZNF689	Q96CS4	500 aa	Predicted RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	CDK5RAP3	Q96JB5	506 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	NACC1	Q96RE7	527 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	MRPL9	Q9BYD2	267 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	TMEM117	Q9H0C3	514 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LMAN2L	Q9H0V9	348 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	POLR3F	Q9H1D9	316 aa	Predicted RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	NSUN3	Q9H649	340 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	ELAC1	Q9H777	363 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	RC3H2	Q9HBD1	1191 aa	Known RBP	11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	GTF3C3	Q9Y5Q9	886 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	MYH15	Q9Y2K3	1946 aa		11.84	□□□□□ -0.51
CDK11A-222	ENST00000498810	LRRIQ4	A6NIV6	560 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	C5orf67	F2Z3F1	127 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	ZBTB39	O15060	712 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	LYPLA2	O95372	231 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	PDC	P20941	246 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	RARRES1	P49788	294 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	RNASEL	Q05823	741 aa	Known RBP	11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	DSC3	Q14574	896 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	LONRF3	Q496Y0	759 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	DTHD1	Q6ZMT9	781 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	ECHDC2	Q86YB7	292 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	ZBTB8OS	Q8IWT0	167 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	MCPH1	Q8NEM0	835 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	ARMC2	Q8NEN0	867 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	RASSF8	Q8NHQ8	419 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	URGCP	Q8TCY9	931 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	HELQ	Q8TDG4	1101 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	MICAL1	Q8TDZ2	1067 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	CLP1	Q92989	425 aa	Known RBP	11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	P2RX5	Q93086	422 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	ASB2	Q96Q27	587 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	CDK15	Q96Q40	435 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	CEP89	Q96ST8	783 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	TRIM6	Q9C030	488 aa	Predicted RBP	11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	ALG13	Q9NP73	1137 aa	Known RBP	11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	CHST12	Q9NRB3	414 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	INPP5F	Q9Y2H2	1132 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	PCDHB6	Q9Y5E3	794 aa		11.83	□□□□□ -0.52
CDK11A-222	ENST00000498810	UNC80	Q8N2C7	3258 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	PRUNE2	Q8WUY3	3088 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	MED24	O75448	989 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	HSP90AA1	P07900	732 aa	Known RBP	11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	RPA1	P27694	616 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	PPM1A	P35813	382 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	TFF2	Q03403	129 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	NAALADL2	Q58DX5	795 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	TCEAL5	Q5H9L2	206 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	GLB1L	Q6UWU2	654 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	CATSPER3	Q86XQ3	398 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	HACE1	Q8IYU2	909 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	KLHL23	Q8NBE8	558 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	PGBD4	Q96DM1	585 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	HSD17B14	Q9BPX1	270 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	BACH2	Q9BYV9	841 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	AGPAT5	Q9NUQ2	364 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810	FAM105A	Q9NUU6	356 aa		11.82	□□□□□ -0.52
CDK11A-222	ENST00000498810		A0A087WWV3	80 aa		11.81	□□□□□ -0.52
CDK11A-222	ENST00000498810		A0A0U1RQF3	1178 aa		11.81	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms