RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 MTCL1Q9Y4B5 1905 aaKnown RBP9.4□□□□□ -0.9
HMGXB4-207ENST00000498212 C2orf16Q68DN1 1984 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 NCOR1O75376 2440 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 C2orf71A6NGG8 1288 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 PI4K2BG5E9Z4 385 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 LAD1O00515 517 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 B4GALT5O43286 388 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 DDHD2O94830 711 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 GALTP07902 379 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 GJB2P29033 226 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 SLC11A1P49279 550 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 AFF1P51825 1210 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 RBM10P98175 930 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 KCNC3Q14003 757 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 PDIA5Q14554 519 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 LLGL2Q6P1M3 1020 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 SLC27A1Q6PCB7 646 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 PADI6Q6TGC4 694 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 DDX53Q86TM3 631 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 TMEM173Q86WV6 379 aaPredicted RBP9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 ZNF280BQ86YH2 543 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 ZBTB8OSQ8IWT0 167 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 VPS52Q8N1B4 723 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 MRPL43Q8N983 215 aaKnown RBP9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 IGSF22Q8N9C0 903 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 VN1R2Q8NFZ6 395 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 SNX29Q8TEQ0 813 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 IGSF21Q96ID5 467 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 ZBP1Q9H171 429 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 PRMT7Q9NVM4 692 aaPredicted RBP9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 HES2Q9Y543 173 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 CITO14578 2027 aa9.39□□□□□ -0.91
HMGXB4-207ENST00000498212 DENND4AQ7Z401 1863 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 TTC28Q96AY4 2481 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 C5orf42Q9H799 3197 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 A0A1B0GUA9 196 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 H3BQV1 296 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 B4GALT3O60512 393 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 NPTXRO95502 500 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 CXCL14O95715 111 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 POMCP01189 267 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ALDH2P05091 517 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 CTSAP10619 480 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ALADP13716 330 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 CYP11B2P19099 503 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 COL9A1P20849 921 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 MLH1P40692 756 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 PRPHP41219 470 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 NAMPTP43490 491 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 GIT2Q14161 759 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 PPP2R5AQ15172 486 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ECM1Q16610 540 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 RILPL1Q5EBL4 403 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 CDCA2Q69YH5 1023 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ANKRD54Q6NXT1 300 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 TMEM184AQ6ZMB5 413 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 DTHD1Q6ZMT9 781 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 HACE1Q8IYU2 909 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 TMEM87AQ8NBN3 555 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 BCL7CQ8WUZ0 217 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 CASP10Q92851 521 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 KIF12Q96FN5 646 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 PRIMPOLQ96LW4 560 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 TMEM175Q9BSA9 504 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 C2orf40Q9H1Z8 148 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 BHMT2Q9H2M3 363 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 NXF3Q9H4D5 531 aaKnown RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 STK39Q9UEW8 545 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 KIAA1024Q9UPX6 916 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 SMC3Q9UQE7 1217 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 FAN1Q9Y2M0 1017 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 GIT1Q9Y2X7 761 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 USP15Q9Y4E8 981 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 HCFC2Q9Y5Z7 792 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 MYH15Q9Y2K3 1946 aa9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 PDCD11Q14690 1871 aaKnown RBP9.38□□□□□ -0.91
HMGXB4-207ENST00000498212 ARL5CA6NH57 179 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 NRP1O14786 923 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 INPPL1O15357 1258 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 OR1G1P47890 313 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 SCNN1GP51170 649 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 MAPK6Q16659 721 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 FAM187BQ17R55 369 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 TMEM132AQ24JP5 1023 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 TMEM31Q5JXX7 168 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 KRT79Q5XKE5 535 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 CDR2LQ86X02 465 aaPredicted RBP9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 COLGALT2Q8IYK4 626 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 DEPTORQ8TB45 409 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 AUTS2Q8WXX7 1259 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 BSNDQ8WZ55 320 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 IFT74Q96LB3 600 aa9.37□□□□□ -0.91
HMGXB4-207ENST00000498212 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms