RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 PLCB3Q01970 1234 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 UBE3AQ05086 875 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 KARSQ15046 597 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 MAPK6Q16659 721 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 SPECC1Q5M775 1068 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 CDK5RAP3Q96JB5 506 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 ZNF558Q96NG5 402 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 CLIC6Q96NY7 704 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 NTPCRQ9BSD7 190 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 TIPINQ9BVW5 301 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 MRPL9Q9BYD2 267 aaKnown RBP17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 NRDE2Q9H7Z3 1164 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 RSAD1Q9HA92 442 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 INPP5FQ9Y2H2 1132 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 CNTNAP2Q9UHC6 1331 aa17.61■□□□□ 0.41
CTDSP1-214ENST00000497677 PRKCBP05771 671 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 ITGA4P13612 1032 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 PLCG1P19174 1290 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 EFNA5P52803 228 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 BCAR1P56945 870 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 ERVFC1P60507 584 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 NT5DC1Q5TFE4 455 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 SLC27A1Q6PCB7 646 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 TAS1R3Q7RTX0 852 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 ZNF280BQ86YH2 543 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 THNSL1Q8IYQ7 743 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 SLC39A11Q8N1S5 342 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 CALML4Q96GE6 196 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 NXF3Q9H4D5 531 aaKnown RBP17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 PDZD7Q9H5P4 517 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 ARHGAP28Q9P2N2 729 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 LZTS1Q9Y250 596 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 PCDHGC5Q9Y5F6 944 aa17.6■□□□□ 0.41
CTDSP1-214ENST00000497677 FNDC1Q4ZHG4 1894 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 NPHP3-ACAD11A0A0J9YXS1 232 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 FSCN2O14926 492 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 DDHD2O94830 711 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 CSPG5O95196 566 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 NPTXRO95502 500 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 SSBP05455 408 aaKnown RBP eCLIP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 GALTP07902 379 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 RAD51AP2Q09MP3 1159 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 HYAL1Q12794 435 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 PRPF4BQ13523 1007 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 CTC1Q2NKJ3 1217 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 TJAP1Q5JTD0 557 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 EEF1DP3Q658K8 133 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 TMEM173Q86WV6 379 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 LINC00301Q8NCQ3 95 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 GSTCDQ8NEC7 633 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 MRPS27Q92552 414 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 SPATA32Q96LK8 384 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 DRC1Q96MC2 740 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 GAD1Q99259 594 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 COL25A1Q9BXS0 654 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 TMEM134Q9H6X4 195 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 UBE2ZQ9H832 354 aaPredicted RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 UBN1Q9NPG3 1134 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 MIOSQ9NXC5 875 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 SPG21Q9NZD8 308 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 KCND2Q9NZV8 630 aa17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 TFIP11Q9UBB9 837 aaKnown RBP17.59■□□□□ 0.41
CTDSP1-214ENST00000497677 ARL5CA6NH57 179 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 NT5C1B-RDH14C9J2C7 533 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 K7ERI5 159 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 BMP1P13497 986 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 PLS3P13797 630 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 GTF2F1P35269 517 aaKnown RBP eCLIP17.58■□□□□ 0.41e-8■■■□□ 18.5
CTDSP1-214ENST00000497677 PPM1AP35813 382 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 ALDH7A1P49419 539 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 DMP1Q13316 513 aaPredicted RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 MCM6Q14566 821 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 FOXD4L6Q3SYB3 417 aaPredicted RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 FOXD4L3Q6VB84 417 aaPredicted RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 ADGRD2Q7Z7M1 963 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 SPIRE2Q8WWL2 714 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 RAD54LQ92698 747 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 SYMPKQ92797 1274 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 PABPC5Q96DU9 382 aaKnown RBP17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 KANSL3Q9P2N6 904 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 DNAJB4Q9UDY4 337 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 GIT1Q9Y2X7 761 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 RALGAPA2Q2PPJ7 1873 aa17.58■□□□□ 0.4
CTDSP1-214ENST00000497677 N4BP3O15049 544 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 ZC3H11AO75152 810 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■■■■ 37.4
CTDSP1-214ENST00000497677 YEATS4O95619 227 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 POMCP01189 267 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 LIG1P18858 919 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 AKAP5P24588 427 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 LTBRP36941 435 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 MLH1P40692 756 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 SLC11A1P49279 550 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 KCNQ1P51787 676 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 GPBP1Q86WP2 473 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 KRI1Q8N9T8 703 aaKnown RBP17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 TMEM161BQ8NDZ6 487 aa17.57■□□□□ 0.4
CTDSP1-214ENST00000497677 URGCPQ8TCY9 931 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms