RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 PTTG1IPP53801 180 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 NRG3P56975 720 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 DUSP2Q05923 314 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 PTPAQ15257 358 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 PLEKHG4Q58EX7 1191 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 DHX37Q8IY37 1157 aaKnown RBP5.06□□□□□ -1.6
CBX3-208ENST00000497498 AHI1Q8N157 1196 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 MYEOVQ96EZ4 313 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 GPR101Q96P66 508 aaPredicted RBP5.06□□□□□ -1.6
CBX3-208ENST00000497498 CRAMP1Q96RY5 1269 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 NDC1Q9BTX1 674 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 TARS2Q9BW92 718 aaKnown RBP5.06□□□□□ -1.6
CBX3-208ENST00000497498 SLC46A2Q9BY10 475 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 EPC1Q9H2F5 836 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 MS4A5Q9H3V2 200 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.06□□□□□ -1.6
CBX3-208ENST00000497498 PRSS50Q9UI38 385 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 PACSIN3Q9UKS6 424 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 PPP2R3BQ9Y5P8 575 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 COL4A3Q01955 1670 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 TGM1P22735 817 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 ADCYAP1R1P41586 468 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 MANFP55145 182 aaKnown RBP5.05□□□□□ -1.6
CBX3-208ENST00000497498 MGAT5Q09328 741 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 SART3Q15020 963 aaKnown RBP5.05□□□□□ -1.6
CBX3-208ENST00000497498 UBE3CQ15386 1083 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 DALRD3Q5D0E6 543 aaKnown RBP5.05□□□□□ -1.6
CBX3-208ENST00000497498 KCNV1Q6PIU1 500 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 LMBR1LQ6UX01 489 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 FRMD7Q6ZUT3 714 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 GLB1L2Q8IW92 636 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 ZNF768Q9H5H4 540 aaKnown RBP5.05□□□□□ -1.6
CBX3-208ENST00000497498 EIF2B4Q9UI10 523 aaKnown RBP5.05□□□□□ -1.6
CBX3-208ENST00000497498 PLAAQ9Y263 795 aa5.05□□□□□ -1.6
CBX3-208ENST00000497498 FKBP9O95302 570 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 LTA4HP09960 611 aaKnown RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 LAG3P18627 525 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 BMP5P22003 454 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 APOBEC3AP31941 199 aaPredicted RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 FAM189BP81408 668 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 PPARAQ07869 468 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 TIGD2Q4W5G0 525 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 C19orf54Q5BKX5 351 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 DRICH1Q6PGQ1 229 aaPredicted RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 FKBP9P1Q75LS8 142 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 LILRA3Q8N6C8 439 aaPredicted RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 GPR150Q8NGU9 434 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 OR2W6PQ8NHA6 318 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 FAM193BQ96PV7 902 aaPredicted RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 DCLRE1CQ96SD1 692 aaKnown RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 FEZ1Q99689 392 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 ANO3Q9BYT9 981 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 EVLQ9UI08 416 aaPredicted RBP5.04□□□□□ -1.6
CBX3-208ENST00000497498 CLCA2Q9UQC9 943 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 HDAC5Q9UQL6 1122 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 CHST2Q9Y4C5 530 aa5.04□□□□□ -1.6
CBX3-208ENST00000497498 PCSK5Q92824 1860 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 CENPVL1A0A0U1RR11 272 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 TMEM200CA6NKL6 621 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 B3GALT2O43825 422 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 LMNAP02545 664 aaKnown RBP5.03□□□□□ -1.6
CBX3-208ENST00000497498 MEF2AQ02078 507 aaPredicted RBP5.03□□□□□ -1.6
CBX3-208ENST00000497498 TAP1Q03518 808 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 TRIM25Q14258 630 aaKnown RBP5.03□□□□□ -1.6
CBX3-208ENST00000497498 CSRP2Q16527 193 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 BROXQ5VW32 411 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 KIAA0907Q7Z7F0 614 aaPredicted RBP5.03□□□□□ -1.6
CBX3-208ENST00000497498 C11orf74Q86VG3 221 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 XYLT1Q86Y38 959 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 OR14C36Q8NHC7 312 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 MFSD3Q96ES6 412 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 TOR3AQ9H497 397 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 PRDM12Q9H4Q4 367 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 EMC7Q9NPA0 242 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 DKK2Q9UBU2 259 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 KCNG1Q9UIX4 513 aa5.03□□□□□ -1.6
CBX3-208ENST00000497498 GAGE12BA1L429 117 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 GAGE12HA6NDE8 117 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 GSG1L2A8MUP6 293 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 PRR5-ARHGAP8B1AHC4 643 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 LEFTY2O00292 366 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 KDM1AO60341 852 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 TMEM127O75204 238 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 CDC45O75419 566 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 HSP90B1P14625 803 aaKnown RBP5.02□□□□□ -1.61
CBX3-208ENST00000497498 IL2P60568 153 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 APBA1Q02410 837 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 GDF7Q7Z4P5 450 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 RASSF3Q86WH2 238 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 SYT12Q8IV01 421 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 SLC5A5Q92911 643 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 KRTAP9-8Q9BYQ0 159 aa5.02□□□□□ -1.61
CBX3-208ENST00000497498 A0A087X0B3 334 aa5.01□□□□□ -1.61
CBX3-208ENST00000497498 B5MCH6 92 aa5.01□□□□□ -1.61
CBX3-208ENST00000497498 RNASET2O00584 256 aaKnown RBP5.01□□□□□ -1.61
CBX3-208ENST00000497498 LPXNO60711 386 aa5.01□□□□□ -1.61
CBX3-208ENST00000497498 ZSCAN20P17040 1043 aaPredicted RBP5.01□□□□□ -1.61
CBX3-208ENST00000497498 KRTAP1-1Q07627 177 aa5.01□□□□□ -1.61
CBX3-208ENST00000497498 DDB1Q16531 1140 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms