RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 DAXXQ9UER7 740 aaPredicted RBP20.23■□□□□ 0.83
COPS6-210ENST00000496358 KCNG1Q9UIX4 513 aa20.23■□□□□ 0.83
COPS6-210ENST00000496358 PRUNE2Q8WUY3 3088 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 NPHP3-ACAD11A0A0J9YXS1 232 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 N4BP3O15049 544 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 FGF18O76093 207 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 DDIT3P35638 169 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 CACNB1Q02641 598 aaPredicted RBP20.22■□□□□ 0.83
COPS6-210ENST00000496358 RNASELQ05823 741 aaKnown RBP20.22■□□□□ 0.83
COPS6-210ENST00000496358 ARSHQ5FYA8 562 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 POF1BQ8WVV4 589 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 LARP4BQ92615 738 aaKnown RBP20.22■□□□□ 0.83
COPS6-210ENST00000496358 APOL6Q9BWW8 343 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 TBC1D13Q9NVG8 400 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 USP20Q9Y2K6 914 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 RBM19Q9Y4C8 960 aaKnown RBP20.22■□□□□ 0.83
COPS6-210ENST00000496358 HES2Q9Y543 173 aa20.22■□□□□ 0.83
COPS6-210ENST00000496358 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
COPS6-210ENST00000496358 TTLL13PA6NNM8 815 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 PPP6R2O75170 966 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 YEATS4O95619 227 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 KRT18P05783 430 aaKnown RBP20.21■□□□□ 0.83
COPS6-210ENST00000496358 PLS3P13797 630 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 COL9A1P20849 921 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 ALDH7A1P49419 539 aaKnown RBP20.21■□□□□ 0.83
COPS6-210ENST00000496358 SMTNP53814 917 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 RRAGBQ5VZM2 374 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 ADPGKQ9BRR6 497 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 GBP3Q9H0R5 595 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 RNF39Q9H2S5 420 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 NXF3Q9H4D5 531 aaKnown RBP20.21■□□□□ 0.83
COPS6-210ENST00000496358 PDZD7Q9H5P4 517 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 NSUN3Q9H649 340 aaKnown RBP20.21■□□□□ 0.83
COPS6-210ENST00000496358 TMEM134Q9H6X4 195 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 KANSL3Q9P2N6 904 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 THEGQ9P2T0 379 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 PHLPP2Q6ZVD8 1323 aa20.21■□□□□ 0.83
COPS6-210ENST00000496358 REV3LO60673 3130 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 SLC16A4O15374 487 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 ZC3H11AO75152 810 aaKnown RBP eCLIP20.2■□□□□ 0.82
COPS6-210ENST00000496358 EDN1P05305 212 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 DNAJB1P25685 340 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 PPM1AP35813 382 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 PBX3P40426 434 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 BCAR1P56945 870 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 UBE3AQ05086 875 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 ATL3Q6DD88 541 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 SPIRE2Q8WWL2 714 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 REEP2Q9BRK0 252 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 NTPCRQ9BSD7 190 aaKnown RBP20.2■□□□□ 0.82
COPS6-210ENST00000496358 SPG21Q9NZD8 308 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
COPS6-210ENST00000496358 ARHGAP28Q9P2N2 729 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 STK17AQ9UEE5 414 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 ODF2LQ9ULJ1 636 aa20.2■□□□□ 0.82
COPS6-210ENST00000496358 FAM13AO94988 1023 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 AKAP5P24588 427 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 KRT17Q04695 432 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 CAMK1Q14012 370 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 TCEAL5Q5H9L2 206 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 NT5DC1Q5TFE4 455 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 ATF7IP2Q5U623 682 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 CCDC73Q6ZRK6 1079 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 MICAL1Q8TDZ2 1067 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 HLA-CQ95604 372 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 FAM193BQ96PV7 902 aaPredicted RBP20.19■□□□□ 0.82
COPS6-210ENST00000496358 GAD1Q99259 594 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 PANK2Q9BZ23 570 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 NRDE2Q9H7Z3 1164 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 PARP2Q9UGN5 583 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 PUF60Q9UHX1 559 aaKnown RBP20.19■□□□□ 0.82
COPS6-210ENST00000496358 CFAP45Q9UL16 551 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 COG5Q9UP83 839 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 GIT1Q9Y2X7 761 aa20.19■□□□□ 0.82
COPS6-210ENST00000496358 CARNS1A5YM72 827 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 ARL5CA6NH57 179 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 NT5C1B-RDH14C9J2C7 533 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 POMCP01189 267 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 MLH1P40692 756 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 AFF1P51825 1210 aaKnown RBP20.18■□□□□ 0.82
COPS6-210ENST00000496358 PLCB3Q01970 1234 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 GIT2Q14161 759 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 EEF1DP3Q658K8 133 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 APBB1IPQ7Z5R6 666 aaPredicted RBP20.18■□□□□ 0.82
COPS6-210ENST00000496358 ZNF280BQ86YH2 543 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 MRPS27Q92552 414 aaKnown RBP20.18■□□□□ 0.82
COPS6-210ENST00000496358 MRPL4Q9BYD3 311 aaKnown RBP20.18■□□□□ 0.82
COPS6-210ENST00000496358 ZHX3Q9H4I2 956 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 TLR9Q9NR96 1032 aa20.18■□□□□ 0.82
COPS6-210ENST00000496358 CUTAO60888 179 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 TBCAO75347 108 aaKnown RBP20.17■□□□□ 0.82
COPS6-210ENST00000496358 BRD1O95696 1058 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 IRS1P35568 1242 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 STAT6P42226 847 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 DNM1Q05193 864 aaKnown RBP20.17■□□□□ 0.82
COPS6-210ENST00000496358 STRN3Q13033 797 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 DCAF4L1Q3SXM0 396 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 SV2BQ7L1I2 683 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 TAS1R3Q7RTX0 852 aa20.17■□□□□ 0.82
COPS6-210ENST00000496358 SLC39A11Q8N1S5 342 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms