RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 SMC1AQ14683 1233 aaKnown RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 PPP4R3CPQ6ZMV5 832 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 GJD3Q8N144 294 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 MRPL43Q8N983 215 aaKnown RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 VN1R2Q8NFZ6 395 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 BCL7CQ8WUZ0 217 aaPredicted RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 IGSF21Q96ID5 467 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
THBS3-208ENST00000496332 FAM193BQ96PV7 902 aaPredicted RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 MMTAG2Q9BU76 263 aaKnown RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 NXF3Q9H4D5 531 aaKnown RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 BARX2Q9UMQ3 279 aaPredicted RBP13.09□□□□□ -0.31
THBS3-208ENST00000496332 FSD2A1L4K1 749 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 VWA3AA6NCI4 1184 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 C2orf71A6NGG8 1288 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 TTLL13PA6NNM8 815 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 CXCL14O95715 111 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 ALDH2P05091 517 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 LIG1P18858 919 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 AKAP5P24588 427 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
THBS3-208ENST00000496332 CA8P35219 290 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 MLH1P40692 756 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 COASYQ13057 564 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 PPP2R5AQ15172 486 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 ZRSR1Q15695 479 aaKnown RBP13.08□□□□□ -0.32
THBS3-208ENST00000496332 SMAD2Q15796 467 aaKnown RBP13.08□□□□□ -0.32
THBS3-208ENST00000496332 FAM187BQ17R55 369 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 KCNK18Q7Z418 384 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 DDX53Q86TM3 631 aaKnown RBP13.08□□□□□ -0.32
THBS3-208ENST00000496332 HACE1Q8IYU2 909 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 VPS52Q8N1B4 723 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 KIFAP3Q92845 792 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 IFT74Q96LB3 600 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 GAD1Q99259 594 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 MIOSQ9NXC5 875 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 PRKAG3Q9UGI9 489 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 FAN1Q9Y2M0 1017 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 GIT1Q9Y2X7 761 aa13.08□□□□□ -0.32
THBS3-208ENST00000496332 NCOR1O75376 2440 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 ACKR2O00590 384 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 NRP1O14786 923 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 INPPL1O15357 1258 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 PRKCBP05771 671 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 SRGAP2BP0DMP2 458 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 SCNN1GP51170 649 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 ZP2Q05996 745 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 PRPF4BQ13523 1007 aaKnown RBP13.07□□□□□ -0.32
THBS3-208ENST00000496332 KCNC3Q14003 757 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 BMS1Q14692 1282 aaKnown RBP13.07□□□□□ -0.32
THBS3-208ENST00000496332 MAPK6Q16659 721 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 TMEM132AQ24JP5 1023 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 ARL6IP4Q66PJ3 421 aaKnown RBP13.07□□□□□ -0.32
THBS3-208ENST00000496332 LLGL2Q6P1M3 1020 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 BRAPQ7Z569 592 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 ADHFE1Q8IWW8 467 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 AUTS2Q8WXX7 1259 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 KHSRPQ92945 711 aaKnown RBP eCLIP13.07□□□□□ -0.32
THBS3-208ENST00000496332 ZFP42Q96MM3 310 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 PNMA5Q96PV4 448 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 KIFC3Q9BVG8 833 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 CCDC113Q9H0I3 377 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 ZBP1Q9H171 429 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 PDZD7Q9H5P4 517 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 USP20Q9Y2K6 914 aa13.07□□□□□ -0.32
THBS3-208ENST00000496332 C5orf42Q9H799 3197 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 VPS37CA5D8V6 355 aaPredicted RBP13.06□□□□□ -0.32
THBS3-208ENST00000496332 N4BP3O15049 544 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 CLASP2O75122 1294 aaKnown RBP13.06□□□□□ -0.32
THBS3-208ENST00000496332 EDN1P05305 212 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 CTSAP10619 480 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 PDCP20941 246 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 OR1G1P47890 313 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 EFNA5P52803 228 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 HYIQ5T013 277 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 RINT1Q6NUQ1 792 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 TMEM184AQ6ZMB5 413 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 C1orf186Q6ZWK4 172 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 COLGALT2Q8IYK4 626 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 PLIN2Q99541 437 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 RUSC1Q9BVN2 902 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 VN1R3Q9BXE9 311 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 EPHX3Q9H6B9 360 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 KLK14Q9P0G3 267 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 PARP2Q9UGN5 583 aa13.06□□□□□ -0.32
THBS3-208ENST00000496332 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.05□□□□□ -0.32
THBS3-208ENST00000496332 C19orf67A6NJJ6 358 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 CCDC169A6NNP5 214 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 HIP1RO75146 1068 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 SSBP05455 408 aaKnown RBP eCLIP13.05□□□□□ -0.32
THBS3-208ENST00000496332 NPTX2P47972 431 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 PEX3P56589 373 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 DSC1Q08554 894 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 ANKRD54Q6NXT1 300 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 CABP7Q86V35 215 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 DAW1Q8N136 415 aa13.05□□□□□ -0.32
THBS3-208ENST00000496332 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms