RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 TMEM8AQ9HCN3 771 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 JPH1Q9HDC5 661 aaPredicted RBP11.96□□□□□ -0.49
CMSS1-208ENST00000496116 KCNG1Q9UIX4 513 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 ZNF214Q9UL59 606 aaPredicted RBP11.96□□□□□ -0.49
CMSS1-208ENST00000496116 ADAMTS5Q9UNA0 930 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 BCS1LQ9Y276 419 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 NFASCO94856 1347 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 WDR81Q562E7 1941 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 KIAA1217Q5T5P2 1943 aa11.96□□□□□ -0.49
CMSS1-208ENST00000496116 H0YCG3 227 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 ATP2A1O14983 1001 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 RPS6KA5O75582 802 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 ADRB2P07550 413 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 KCNA2P16389 499 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 ADSSP30520 456 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 RTP1P59025 263 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 HLTFQ14527 1009 aaKnown RBP eCLIP11.96□□□□□ -0.5
CMSS1-208ENST00000496116 CBWD2Q8IUF1 395 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 RPUSD2Q8IZ73 545 aaKnown RBP11.96□□□□□ -0.5
CMSS1-208ENST00000496116 PPM1KQ8N3J5 372 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 PLEKHO2Q8TD55 490 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 TAS2R14Q9NYV8 317 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 TMOD4Q9NZQ9 345 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 CTTNBP2NLQ9P2B4 639 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 SLC9A2Q9UBY0 812 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 IGSF9BQ9UPX0 1349 aa11.96□□□□□ -0.5
CMSS1-208ENST00000496116 RLFQ13129 1914 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 GOLGA6L10A0A0M3HER8 536 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 RTN2O75298 545 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FTLP02792 175 aaPredicted RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 GZMAP12544 262 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 GTF2H1P32780 548 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 GUCY2FP51841 1108 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 GPC5P78333 572 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 MAP2K1Q02750 393 aaPredicted RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 TCEAL1Q15170 157 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 SWSAP1Q6NVH7 229 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 PALB2Q86YC2 1186 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FAM71AQ8IYT1 594 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ZSWIM2Q8NEG5 633 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 TMC2Q8TDI7 906 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 PARD3BQ8TEW8 1205 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 SLC20A1Q8WUM9 679 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 POMGNT1Q8WZA1 660 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 CCDC127Q96BQ5 260 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ARHGEF26Q96DR7 871 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 SAAL1Q96ER3 474 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 IFT74Q96LB3 600 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ZIM3Q96PE6 472 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 KIFC3Q9BVG8 833 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ARID2Q68CP9 1835 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 MIF4GDA9UHW6 222 aaKnown RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ANKRD63C9JTQ0 380 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 HNRNPDLO14979 420 aaKnown RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 DDX3YO15523 660 aaKnown RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FGGP02679 453 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FAM153BP0C7A2 387 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 GPC3P51654 580 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ENPEPQ07075 957 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 TMEM132BQ14DG7 1078 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FAM153CQ494X1 144 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 BRDTQ58F21 947 aaPredicted RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ANGEL2Q5VTE6 544 aaKnown RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 C11orf63Q6NUN7 778 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 MIS18BP1Q6P0N0 1132 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 CATSPERGQ6ZRH7 1159 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 UBL4BQ8N7F7 174 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FBXL13Q8NEE6 735 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 EPS8L1Q8TE68 723 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 LRRC45Q96CN5 670 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FBXL18Q96ME1 805 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 MTFR1LQ9H019 292 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 DDX47Q9H0S4 455 aaKnown RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 ATP6V0A4Q9HBG4 840 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 HOXC10Q9NYD6 342 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 CYP39A1Q9NYL5 469 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 SEPT9Q9UHD8 586 aaPredicted RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 FAM153AQ9UHL3 310 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 COQ4Q9Y3A0 265 aa11.95□□□□□ -0.5
CMSS1-208ENST00000496116 UTP11Q9Y3A2 253 aaKnown RBP11.95□□□□□ -0.5
CMSS1-208ENST00000496116 A6NNZ2 444 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 ZNF862O60290 1169 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 GARTP22102 1010 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 PRPF4BQ13523 1007 aaKnown RBP11.94□□□□□ -0.5
CMSS1-208ENST00000496116 TUBB8Q3ZCM7 444 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 IQCKQ8N0W5 287 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 GPD1LQ8N335 351 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 MORC4Q8TE76 937 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 SHC3Q92529 594 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 BICD1Q96G01 975 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 FAM81BQ96LP2 452 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 RNPC3Q96LT9 517 aaKnown RBP11.94□□□□□ -0.5
CMSS1-208ENST00000496116 MFSD14AQ96MC6 490 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 NT5C1BQ96P26 610 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 A1CFQ9NQ94 594 aaKnown RBP11.94□□□□□ -0.5
CMSS1-208ENST00000496116 CYP26B1Q9NR63 512 aa11.94□□□□□ -0.5
CMSS1-208ENST00000496116 RGS20O76081 388 aa11.93□□□□□ -0.5
CMSS1-208ENST00000496116 HSPA9P38646 679 aaKnown RBP11.93□□□□□ -0.5
CMSS1-208ENST00000496116 PDE6CP51160 858 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms