RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	PRPF40A	O75400	957 aa	Known RBP	13.12	□□□□□ -0.31
APTX-233	ENST00000496030	ACTN1	P12814	892 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	FAM189B	P81408	668 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	DEFB103A	P81534	67 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	FAM187B	Q17R55	369 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	KRBA2	Q6ZNG9	492 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	FAM43B	Q6ZT52	329 aa	Predicted RBP	13.12	□□□□□ -0.31
APTX-233	ENST00000496030	TMEM161B	Q8NDZ6	487 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	IFT74	Q96LB3	600 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	PYM1	Q9BRP8	204 aa	Known RBP	13.12	□□□□□ -0.31
APTX-233	ENST00000496030	LMCD1	Q9NZU5	365 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	USP20	Q9Y2K6	914 aa		13.12	□□□□□ -0.31
APTX-233	ENST00000496030	TECTA	O75443	2155 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	GOLGA6L4	A6NEF3	574 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	CCDC169	A6NNP5	214 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030		C9IYK1	514 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	INO80B-WBP1	J3KQ70	363 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	SLC16A4	O15374	487 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	KRT18	P05783	430 aa	Known RBP	13.11	□□□□□ -0.31
APTX-233	ENST00000496030	MAPT	P10636	758 aa	Known RBP	13.11	□□□□□ -0.31
APTX-233	ENST00000496030	SFPQ	P23246	707 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
APTX-233	ENST00000496030	AFM	P43652	599 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	NCKAP1L	P55160	1127 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	FAM160A1	Q05DH4	1040 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	EHHADH	Q08426	723 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	DMP1	Q13316	513 aa	Predicted RBP	13.11	□□□□□ -0.31
APTX-233	ENST00000496030	CUL4B	Q13620	913 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	ODR4	Q5SWX8	454 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	UBXN11	Q5T124	520 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	NT5DC1	Q5TFE4	455 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	PPP4R3CP	Q6ZMV5	832 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	CATSPER4	Q7RTX7	472 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	MYCT1	Q8N699	235 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	DEPTOR	Q8TB45	409 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	ADAM2	Q99965	735 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	STRA6	Q9BX79	667 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	FTHL17	Q9BXU8	183 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	C2orf40	Q9H1Z8	148 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	BLZF1	Q9H2G9	400 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	TMEM134	Q9H6X4	195 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	PARVG	Q9HBI0	331 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	CHST12	Q9NRB3	414 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	RGS18	Q9NS28	235 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	LMBRD1	Q9NUN5	540 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	AGPAT5	Q9NUQ2	364 aa		13.11	□□□□□ -0.31
APTX-233	ENST00000496030	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-233	ENST00000496030	ACKR2	O00590	384 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	KLRC4	O43908	158 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	TRAK2	O60296	914 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	EFCAB14	O75071	495 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	NR1I2	O75469	434 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	FAM13A	O94988	1023 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	PRR29	P0C7W0	189 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	ARF4	P18085	180 aa	Predicted RBP	13.1	□□□□□ -0.31
APTX-233	ENST00000496030	NMT1	P30419	496 aa	Known RBP	13.1	□□□□□ -0.31
APTX-233	ENST00000496030	EFNA5	P52803	228 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
APTX-233	ENST00000496030	HAUS6	Q7Z4H7	955 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	SFR1	Q86XK3	245 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	CEP57L1	Q8IYX8	460 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	PRSS33	Q8NF86	280 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	TRAIP	Q9BWF2	469 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	FGFBP2	Q9BYJ0	223 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	LRRC27	Q9C0I9	530 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	ST6GALNAC4	Q9H4F1	302 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	KMT5A	Q9NQR1	393 aa		13.1	□□□□□ -0.31
APTX-233	ENST00000496030	LARS	Q9P2J5	1176 aa	Known RBP	13.1	□□□□□ -0.31
APTX-233	ENST00000496030		A0A1B0GUA9	196 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030		H3BQ06	376 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-233	ENST00000496030		K7ERI5	159 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	TBCA	O75347	108 aa	Known RBP	13.09	□□□□□ -0.31
APTX-233	ENST00000496030	PPP1R37	O75864	691 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	PRKCB	P05771	671 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	GAP43	P17677	238 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	UBE2H	P62256	183 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	GTF2B	Q00403	316 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	AMPD3	Q01432	767 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	SLC24A5	Q71RS6	500 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	ZNF720	Q7Z2F6	126 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	ZNF598	Q86UK7	904 aa	Known RBP	13.09	□□□□□ -0.31
APTX-233	ENST00000496030	ZBTB8OS	Q8IWT0	167 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	GLIS3	Q8NEA6	775 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	HPS3	Q969F9	1004 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	TOP1MT	Q969P6	601 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	CPB2	Q96IY4	423 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	PRIMPOL	Q96LW4	560 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	TIGD1	Q96MW7	591 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	ZHX3	Q9H4I2	956 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	OLFML3	Q9NRN5	406 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	PANK4	Q9NVE7	773 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	PRMT7	Q9NVM4	692 aa	Predicted RBP	13.09	□□□□□ -0.31
APTX-233	ENST00000496030	SEL1L	Q9UBV2	794 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	KCNG1	Q9UIX4	513 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	CNTNAP2	Q9UHC6	1331 aa		13.09	□□□□□ -0.31
APTX-233	ENST00000496030	COL4A6	Q14031	1691 aa		13.08	□□□□□ -0.31
APTX-233	ENST00000496030	MYO7A	Q13402	2215 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.08	□□□□□ -0.32
APTX-233	ENST00000496030		A0A0U1RQF3	1178 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	PVALEF	A0A1B0GWK0	134 aa		13.08	□□□□□ -0.32
APTX-233	ENST00000496030	DENND3	A2RUS2	1198 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms