RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 TRIM6Q9C030 488 aaPredicted RBP26.82■■□□□ 1.88
HLA-C-209ENST00000495835 GPRC5CQ9NQ84 441 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 KIAA1024Q9UPX6 916 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 GIT1Q9Y2X7 761 aa26.82■■□□□ 1.88
HLA-C-209ENST00000495835 HIDE1A8MVS5 230 aa26.81■■□□□ 1.88
HLA-C-209ENST00000495835 CLUL1Q15846 466 aa26.81■■□□□ 1.88
HLA-C-209ENST00000495835 ECM1Q16610 540 aa26.81■■□□□ 1.88
HLA-C-209ENST00000495835 MAEAQ7L5Y9 396 aa26.81■■□□□ 1.88
HLA-C-209ENST00000495835 SNX29Q8TEQ0 813 aa26.81■■□□□ 1.88
HLA-C-209ENST00000495835 EIF2AQ9BY44 585 aaKnown RBP26.81■■□□□ 1.88
HLA-C-209ENST00000495835 DNM3Q9UQ16 869 aa26.81■■□□□ 1.88
HLA-C-209ENST00000495835 C2orf71A6NGG8 1288 aa26.8■■□□□ 1.88
HLA-C-209ENST00000495835 HOXB8P17481 243 aaPredicted RBP26.8■■□□□ 1.88
HLA-C-209ENST00000495835 ATP2C1P98194 919 aaPredicted RBP26.8■■□□□ 1.88
HLA-C-209ENST00000495835 ZNF280BQ86YH2 543 aa26.8■■□□□ 1.88
HLA-C-209ENST00000495835 VPS52Q8N1B4 723 aa26.8■■□□□ 1.88
HLA-C-209ENST00000495835 ZBP1Q9H171 429 aa26.8■■□□□ 1.88
HLA-C-209ENST00000495835 BHMT2Q9H2M3 363 aa26.8■■□□□ 1.88
HLA-C-209ENST00000495835 DDX19AQ9NUU7 478 aaKnown RBP26.8■■□□□ 1.88
HLA-C-209ENST00000495835 DNAJB4Q9UDY4 337 aa26.8■■□□□ 1.88
HLA-C-209ENST00000495835 BARX2Q9UMQ3 279 aaPredicted RBP26.8■■□□□ 1.88
HLA-C-209ENST00000495835 ARL5CA6NH57 179 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 DDHD2O94830 711 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 CXCL14O95715 111 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 CTSAP10619 480 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 SLC11A1P49279 550 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 EFNA5P52803 228 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 LARP1BQ659C4 914 aaKnown RBP26.79■■□□□ 1.88
HLA-C-209ENST00000495835 ARL6IP4Q66PJ3 421 aaKnown RBP26.79■■□□□ 1.88
HLA-C-209ENST00000495835 CASP10Q92851 521 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 IFT74Q96LB3 600 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 GBP3Q9H0R5 595 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 FAN1Q9Y2M0 1017 aa26.79■■□□□ 1.88
HLA-C-209ENST00000495835 ALADP13716 330 aa26.78■■□□□ 1.88
HLA-C-209ENST00000495835 MAPK6Q16659 721 aa26.78■■□□□ 1.88
HLA-C-209ENST00000495835 TMEM173Q86WV6 379 aaPredicted RBP26.78■■□□□ 1.88
HLA-C-209ENST00000495835 VN1R2Q8NFZ6 395 aa26.78■■□□□ 1.88
HLA-C-209ENST00000495835 RNF39Q9H2S5 420 aa26.78■■□□□ 1.88
HLA-C-209ENST00000495835 EPHX3Q9H6B9 360 aa26.78■■□□□ 1.88
HLA-C-209ENST00000495835 TDRD15B5MCY1 1934 aaKnown RBP26.77■■□□□ 1.88
HLA-C-209ENST00000495835 ACKR2O00590 384 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 N4BP3O15049 544 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 B4GALT5O43286 388 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 POMCP01189 267 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 AFF1P51825 1210 aaKnown RBP26.77■■□□□ 1.88
HLA-C-209ENST00000495835 IL17AQ16552 155 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 ANKRD54Q6NXT1 300 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 DEPTORQ8TB45 409 aa26.77■■□□□ 1.88
HLA-C-209ENST00000495835 NRP1O14786 923 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 NR1I2O75469 434 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 DSC1Q08554 894 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 CUL4AQ13619 759 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 HYIQ5T013 277 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 COLGALT2Q8IYK4 626 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 BSNDQ8WZ55 320 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 SUSD6Q92537 303 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 GAD1Q99259 594 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 TIPINQ9BVW5 301 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 CCDC113Q9H0I3 377 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 NT5C3AQ9H0P0 336 aa26.76■■□□□ 1.87
HLA-C-209ENST00000495835 PHLPP2Q6ZVD8 1323 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 SLC26A4O43511 780 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 B4GALT3O60512 393 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 GPR37L1O60883 481 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 NPTXRO95502 500 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 MLH1P40692 756 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 PRPF4BQ13523 1007 aaKnown RBP26.75■■□□□ 1.87
HLA-C-209ENST00000495835 TPRNQ4KMQ1 711 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 BRAPQ7Z569 592 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 TMEM87AQ8NBN3 555 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 KHSRPQ92945 711 aaKnown RBP eCLIP26.75■■□□□ 1.87
HLA-C-209ENST00000495835 MMTAG2Q9BU76 263 aaKnown RBP26.75■■□□□ 1.87
HLA-C-209ENST00000495835 NXF3Q9H4D5 531 aaKnown RBP26.75■■□□□ 1.87
HLA-C-209ENST00000495835 C17orf75Q9HAS0 396 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 SSX2IPQ9Y2D8 614 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 USP15Q9Y4E8 981 aaPredicted RBP26.75■■□□□ 1.87
HLA-C-209ENST00000495835 HES2Q9Y543 173 aa26.75■■□□□ 1.87
HLA-C-209ENST00000495835 CLASP2O75122 1294 aaKnown RBP26.74■■□□□ 1.87
HLA-C-209ENST00000495835 BMP15O95972 392 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 PRKCBP05771 671 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 PPFIBP1Q86W92 1011 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 BCL7CQ8WUZ0 217 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-209ENST00000495835 ADPGKQ9BRR6 497 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 PHF7Q9BWX1 381 aaPredicted RBP26.74■■□□□ 1.87
HLA-C-209ENST00000495835 S1PR5Q9H228 398 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 KCNG1Q9UIX4 513 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 HCFC2Q9Y5Z7 792 aa26.74■■□□□ 1.87
HLA-C-209ENST00000495835 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.73■■□□□ 1.87
HLA-C-209ENST00000495835 E9PMD0 336 aa26.73■■□□□ 1.87
HLA-C-209ENST00000495835 PDCP20941 246 aa26.73■■□□□ 1.87
HLA-C-209ENST00000495835 RBM10P98175 930 aaKnown RBP26.73■■□□□ 1.87
HLA-C-209ENST00000495835 AK8Q96MA6 479 aa26.73■■□□□ 1.87
HLA-C-209ENST00000495835 DRC1Q96MC2 740 aa26.73■■□□□ 1.87
HLA-C-209ENST00000495835 BACH2Q9BYV9 841 aa26.73■■□□□ 1.87
HLA-C-209ENST00000495835 MIOSQ9NXC5 875 aa26.73■■□□□ 1.87
HLA-C-209ENST00000495835 PP2D1A8MPX8 630 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 SCNN1GP51170 649 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 ITIH3Q06033 890 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 GRIK3Q13003 919 aa26.72■■□□□ 1.87
HLA-C-209ENST00000495835 TMEM31Q5JXX7 168 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms