RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 CABP7Q86V35 215 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 SUGP1Q8IWZ8 645 aaKnown RBP20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 HACE1Q8IYU2 909 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 SLC22A17Q8WUG5 538 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 GAD1Q99259 594 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 CSRNP2Q9H175 543 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 POLR3FQ9H1D9 316 aaPredicted RBP20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 TMEM60Q9H2L4 133 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 LIMCH1Q9UPQ0 1083 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 TRIOO75962 3097 aa20.46■□□□□ 0.87
CLCNKA-207ENST00000495784 A0A087WWV3 80 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 SPDYE4A6NLX3 237 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 NRP1O14786 923 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 USO1O60763 962 aaKnown RBP20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 SEC24BO95487 1268 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 WEE2P0C1S8 567 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 GLRA2P23416 452 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 MLH1P40692 756 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 ATAT1Q5SQI0 421 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 C8orf76Q96K31 380 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 APOL6Q9BWW8 343 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 NFKBIZQ9BYH8 718 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 MRPL17Q9NRX2 175 aaKnown RBP20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 PRG3Q9Y2Y8 225 aaPredicted RBP20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 HES2Q9Y543 173 aa20.45■□□□□ 0.86
CLCNKA-207ENST00000495784 ARL5CA6NH57 179 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 ARF4P18085 180 aaPredicted RBP20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 KLRC2P26717 231 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 OR1G1P47890 313 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 KIAA1841Q6NSI8 718 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 MAEAQ7L5Y9 396 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 CCDC83Q8IWF9 413 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 RNF39Q9H2S5 420 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 TUFT1Q9NNX1 390 aa20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 DBR1Q9UK59 544 aaKnown RBP20.44■□□□□ 0.86
CLCNKA-207ENST00000495784 LRRIQ4A6NIV6 560 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 C2CD4DB7Z1M9 353 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 NR1I2O75469 434 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 URODP06132 367 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 SPATA31C1P0DKV0 1188 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 SCNN1GP51170 649 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 NHLH1Q02575 133 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 AMHR2Q16671 573 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 KANK3Q6NY19 840 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 TMC5Q6UXY8 1006 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 COLGALT2Q8IYK4 626 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 FBXL6Q8N531 539 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 MCPH1Q8NEM0 835 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 ERMNQ8TAM6 284 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 ZFP42Q96MM3 310 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 KLHL5Q96PQ7 755 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 LLPHQ9BRT6 129 aaKnown RBP20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 SFXN1Q9H9B4 322 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 GIT1Q9Y2X7 761 aa20.43■□□□□ 0.86
CLCNKA-207ENST00000495784 C2CD2LO14523 706 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 INPPL1O15357 1258 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 B4GALT5O43286 388 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 SOD2P04179 222 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 CNPP09543 421 aaKnown RBP20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 CATSPER3Q86XQ3 398 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 TDRD5Q8NAT2 981 aaKnown RBP20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 KREMEN2Q8NCW0 462 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 NACC1Q96RE7 527 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 NXF3Q9H4D5 531 aaKnown RBP20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 GPRC5CQ9NQ84 441 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 MARCH5Q9NX47 278 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 SSX2IPQ9Y2D8 614 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 ZNF318Q5VUA4 2279 aa20.42■□□□□ 0.86
CLCNKA-207ENST00000495784 MED24O75448 989 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 NPTXRO95502 500 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 OR52Z1P0C646 297 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 DSC1Q08554 894 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 MTMR3Q13615 1198 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 GNL2Q13823 731 aaKnown RBP20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 ZNF174Q15697 407 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 SLC27A1Q6PCB7 646 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 ALYREFQ86V81 257 aaKnown RBP20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 CDR2LQ86X02 465 aaPredicted RBP20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 ZBTB8OSQ8IWT0 167 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 ASIC4Q96FT7 647 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 HERC2P3Q9BVR0 1158 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 FOXP1Q9H334 677 aaPredicted RBP20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 SORCS3Q9UPU3 1222 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 PIEZO1Q92508 2521 aa20.41■□□□□ 0.86
CLCNKA-207ENST00000495784 A0A1B0GUA9 196 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 LILRB3O75022 631 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 AKAP5P24588 427 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 CLCN4P51793 760 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 ORC2Q13416 577 aaPredicted RBP20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 POTEGQ6S5H5 508 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 FAM184AQ8NB25 1140 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 RPS6KC1Q96S38 1066 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 POLR3CQ9BUI4 534 aaPredicted RBP20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 COLEC11Q9BWP8 271 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 PRMT7Q9NVM4 692 aaPredicted RBP20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 MIOSQ9NXC5 875 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 USTQ9Y2C2 406 aa20.4■□□□□ 0.86
CLCNKA-207ENST00000495784 ARHGEF35A5YM69 484 aa20.39■□□□□ 0.85
CLCNKA-207ENST00000495784 ADH1AP07327 375 aa20.39■□□□□ 0.85
CLCNKA-207ENST00000495784 GLUD2P49448 558 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms