RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 TBKBP1A7MCY6 615 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 N4BP3O15049 544 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 RAB27AP51159 221 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 STRN3Q13033 797 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 COASYQ13057 564 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 CLLU1OSQ5K130 101 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 ATF7IP2Q5U623 682 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 PPP2R2DQ66LE6 453 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 KRBA2Q6ZNG9 492 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 CCDC65Q8IXS2 484 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 FMR1NBQ8N0W7 255 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-212ENST00000495497 TMEM87AQ8NBN3 555 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 CNNM3Q8NE01 707 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 ENGASEQ8NFI3 743 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 SP7Q8TDD2 431 aaPredicted RBP21.36■■□□□ 1.01
HDAC4-212ENST00000495497 HELQQ8TDG4 1101 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 CCDC51Q96ER9 411 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 ACO2Q99798 780 aaKnown RBP21.36■■□□□ 1.01
HDAC4-212ENST00000495497 APOL6Q9BWW8 343 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 MRPL4Q9BYD3 311 aaKnown RBP21.36■■□□□ 1.01
HDAC4-212ENST00000495497 MRPL44Q9H9J2 332 aaKnown RBP21.36■■□□□ 1.01
HDAC4-212ENST00000495497 USP25Q9UHP3 1055 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 IPPQ9Y573 584 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 GBF1Q92538 1859 aa21.36■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF623O75123 536 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 EOMESO95936 686 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 PRR29P0C7W0 189 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 SKIP12755 728 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 TAP1Q03518 808 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 SNW1Q13573 536 aaKnown RBP21.35■■□□□ 1.01
HDAC4-212ENST00000495497 BTG3Q14201 252 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-212ENST00000495497 CNNM4Q6P4Q7 775 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF720Q7Z2F6 126 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 MRPL10Q7Z7H8 261 aaKnown RBP21.35■■□□□ 1.01
HDAC4-212ENST00000495497 ZBTB45Q96K62 511 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-212ENST00000495497 CASD1Q96PB1 797 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 TRIM6Q9C030 488 aaPredicted RBP21.35■■□□□ 1.01
HDAC4-212ENST00000495497 NXF3Q9H4D5 531 aaKnown RBP21.35■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF576Q9H609 170 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 HCSTQ9UBK5 93 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 SEL1LQ9UBV2 794 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 TBX20Q9UMR3 447 aa21.35■■□□□ 1.01
HDAC4-212ENST00000495497 COL4A6Q14031 1691 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 SZT2Q5T011 3432 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 H0YCG3 227 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 PRPF40AO75400 957 aaKnown RBP21.34■■□□□ 1.01
HDAC4-212ENST00000495497 MYBP10242 640 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 CASP5P51878 434 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 GTF2BQ00403 316 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 ZNF697Q5TEC3 545 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 AGMOQ6ZNB7 445 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 ZBTB33Q86T24 672 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 FIBCD1Q8N539 461 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 GLIS3Q8NEA6 775 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 IKZF4Q9H2S9 585 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 SEMA6BQ9H3T3 888 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 RNF216Q9NWF9 866 aaPredicted RBP21.34■■□□□ 1.01
HDAC4-212ENST00000495497 MTUS1Q9ULD2 1270 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 TNFSF13BQ9Y275 285 aa21.34■■□□□ 1.01
HDAC4-212ENST00000495497 NR1I2O75469 434 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 ITGA4P13612 1032 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 AKAP5P24588 427 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 FAM160A1Q05DH4 1040 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 UNC13DQ70J99 1090 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 PGBD4Q96DM1 585 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 BICD1Q96G01 975 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 STRA6Q9BX79 667 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 PTPRHQ9HD43 1115 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 MRPL42Q9Y6G3 142 aaKnown RBP21.33■■□□□ 1.01
HDAC4-212ENST00000495497 MYH11P35749 1972 aa21.33■■□□□ 1.01
HDAC4-212ENST00000495497 ABLIM1O14639 778 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 GTPBP6O43824 516 aaPredicted RBP21.32■■□□□ 1
HDAC4-212ENST00000495497 KLRC4O43908 158 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 GCNT3O95395 438 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 HARSP12081 509 aaKnown RBP21.32■■□□□ 1
HDAC4-212ENST00000495497 AFF1P51825 1210 aaKnown RBP21.32■■□□□ 1
HDAC4-212ENST00000495497 KCNA1Q09470 495 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 CMTR2Q8IYT2 770 aaKnown RBP21.32■■□□□ 1
HDAC4-212ENST00000495497 KCNN1Q92952 543 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 ADPGKQ9BRR6 497 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 C17orf80Q9BSJ5 609 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 TMEM117Q9H0C3 514 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 ST6GALNAC4Q9H4F1 302 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 OLFML3Q9NRN5 406 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 SNTG2Q9NY99 539 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 INPP5FQ9Y2H2 1132 aa21.32■■□□□ 1
HDAC4-212ENST00000495497 HOXA2O43364 376 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 OFD1O75665 1012 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 PPP1R37O75864 691 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 PROZP22891 400 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 GRIN2CQ14957 1233 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 ZNF568Q3ZCX4 644 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 GPR153Q6NV75 609 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 CLEC17AQ6ZS10 378 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 LRRC55Q6ZSA7 311 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 MAP4K3Q8IVH8 894 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 ABI1Q8IZP0 508 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 DEFB123Q8N688 67 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 CEP120Q8N960 986 aa21.31■■□□□ 1
HDAC4-212ENST00000495497 SLC17A8Q8NDX2 589 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms