RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 GLRA2P23416 452 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 COPB2P35606 906 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 STAT1P42224 750 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 BMS1Q14692 1282 aaKnown RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 EMC2Q15006 297 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 MEI1Q5TIA1 1274 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 PRRT2Q7Z6L0 340 aaPredicted RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 TEX2Q8IWB9 1127 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 LRRC71Q8N4P6 559 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 LRRC57Q8N9N7 239 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 PARD3BQ8TEW8 1205 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 BTBD6Q96KE9 485 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 SENP7Q9BQF6 1050 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 PDE11AQ9HCR9 933 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 ZNF302Q9NR11 478 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 ARGLU1Q9NWB6 273 aaPredicted RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 NR2E1Q9Y466 385 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 PCDHGC5Q9Y5F6 944 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 GTPBP10A4D1E9 387 aaKnown RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 CCDC151A5D8V7 595 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 POTEB2H3BUK9 544 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 PHACTR2O75167 634 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 KRT13P13646 458 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 IRX3P78415 501 aaPredicted RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 STXBP4Q6ZWJ1 553 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 ALS2CR12Q96Q35 445 aa11.27□□□□□ -0.61
SAMM50-206ENST00000494795 NUCKS1Q9H1E3 243 aaKnown RBP11.27□□□□□ -0.61
SAMM50-206ENST00000494795 UBE4BO95155 1302 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 LRRIQ4A6NIV6 560 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 EIF3JO75822 258 aaKnown RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 GGPS1O95749 300 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 CFHP08603 1231 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 ZBTB48P10074 688 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 FDX1P10109 184 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 POLGP54098 1239 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 PPP2R5AQ15172 486 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 ADAT2Q7Z6V5 191 aaKnown RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 NOP9Q86U38 636 aaKnown RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 RIOX2Q8IUF8 465 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 TPCN2Q8NHX9 752 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 ATP6V0A1Q93050 837 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 BICD1Q96G01 975 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 TARS2Q9BW92 718 aaKnown RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 AP1M1Q9BXS5 423 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 MAFBQ9Y5Q3 323 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 KCNK3O14649 394 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 GLI1P08151 1106 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 CHRNB2P17787 502 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 TCF7P36402 384 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 MXI1P50539 228 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 MAP1SQ66K74 1059 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 INTS8Q75QN2 995 aaKnown RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 SV2AQ7L0J3 742 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 SMAP1Q8IYB5 467 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 SLC35G2Q8TBE7 412 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 ANKFY1Q9P2R3 1169 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 PPP2R3BQ9Y5P8 575 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 CAPN15O75808 1086 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 MMEP08473 750 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 ITGA4P13612 1032 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 EPHX2P34913 555 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 DAB2IPQ5VWQ8 1189 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 GPAT2Q6NUI2 795 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 CRELD2Q6UXH1 353 aaPredicted RBP11.26□□□□□ -0.61
SAMM50-206ENST00000494795 WDR70Q9NW82 654 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 FBXL5Q9UKA1 691 aa11.26□□□□□ -0.61
SAMM50-206ENST00000494795 MAP2K7O14733 419 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 BUB1BO60566 1050 aaPredicted RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 OATP04181 439 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 OAS2P29728 719 aaKnown RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 TNFSF9P41273 254 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 MARCKSL1P49006 195 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 SMC1AQ14683 1233 aaKnown RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 GNPTABQ3T906 1256 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 NAA35Q5VZE5 725 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 MIS18BP1Q6P0N0 1132 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 OTUD6AQ7L8S5 288 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 NTPCRQ9BSD7 190 aaKnown RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 ARHGAP28Q9P2N2 729 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 FBXO40Q9UH90 709 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 UMODL1Q5DID0 1318 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 DGAT1O75907 488 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 SMTNP53814 917 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 ZNF211Q13398 564 aaPredicted RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 PRPF4BQ13523 1007 aaKnown RBP11.25□□□□□ -0.61
SAMM50-206ENST00000494795 CASP8Q14790 479 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 DCAF12L1Q5VU92 463 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 KLHL7Q8IXQ5 586 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 METTL13Q8N6R0 699 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 HELQQ8TDG4 1101 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 ST6GALNAC4Q9H4F1 302 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 NFASCO94856 1347 aa11.25□□□□□ -0.61
SAMM50-206ENST00000494795 MAFGO15525 162 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 ATG7O95352 703 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 H2AFZP0C0S5 128 aa11.24□□□□□ -0.61
SAMM50-206ENST00000494795 CYP24A1Q07973 514 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms