RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 ANKRD20A2Q5SQ80 823 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 ANKRD20A1Q5TYW2 823 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 ANKRD20A3Q5VUR7 823 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 NUGGCQ68CJ6 796 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 AMIGO3Q86WK7 504 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 SERPINB12Q96P63 405 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 CCDC113Q9H0I3 377 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 MLXIPLQ9NP71 852 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 NARFQ9UHQ1 456 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 CNTNAP4Q9C0A0 1308 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 EME2A4GXA9 379 aaPredicted RBP16.51■□□□□ 0.23
SDF4-207ENST00000494748 A6NHS1 94 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 LRRN2O75325 713 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 MTA2O94776 668 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 CETPP11597 493 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 IL1R1P14778 569 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 TNFAIP3P21580 790 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 PDE6BP35913 854 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 IRX1P78414 480 aaPredicted RBP16.51■□□□□ 0.23
SDF4-207ENST00000494748 ARHGAP4P98171 946 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 QRICH1Q2TAL8 776 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 RINT1Q6NUQ1 792 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 TRMT10CQ7L0Y3 403 aaKnown RBP16.51■□□□□ 0.23
SDF4-207ENST00000494748 CYP4X1Q8N118 509 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 RPS6KC1Q96S38 1066 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 MKNK1Q9BUB5 465 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 HOMER3Q9NSC5 361 aa16.51■□□□□ 0.23
SDF4-207ENST00000494748 EML1O00423 815 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 LIN7AO14910 233 aaPredicted RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 GNAZP19086 355 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 HSPA2P54652 639 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 PRR16Q569H4 304 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 ECHDC2Q86YB7 292 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 SLC13A5Q86YT5 568 aaPredicted RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 DDX4Q9NQI0 724 aaKnown RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 NKX1-2Q9UD57 310 aaPredicted RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 TBX3O15119 743 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 WFS1O76024 890 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 CHRNB2P17787 502 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 IVDP26440 423 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 TMEM63BQ5T3F8 832 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 DNAJC18Q9H819 358 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 CORO1CQ9ULV4 474 aaPredicted RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 FTLP02792 175 aaPredicted RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 SHMT1P34896 483 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 ZKSCAN8Q15776 578 aaPredicted RBP16.5■□□□□ 0.23
SDF4-207ENST00000494748 RNF43Q68DV7 783 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 MIGA2Q7L4E1 593 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 SLCO2A1Q92959 643 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 RUNDC3BQ96NL0 473 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 PCDHB18PQ96TA0 734 aa16.5■□□□□ 0.23
SDF4-207ENST00000494748 LINGO3P0C6S8 592 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 SKIV2L2P42285 1042 aaKnown RBP16.49■□□□□ 0.23
SDF4-207ENST00000494748 CYP4A11Q02928 519 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 UBL4BQ8N7F7 174 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 EYA4O95677 639 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 GRAPQ13588 217 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 ARHGAP44Q17R89 818 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 GPATCH4Q5T3I0 446 aaKnown RBP16.49■□□□□ 0.23
SDF4-207ENST00000494748 DHX37Q8IY37 1157 aaKnown RBP16.49■□□□□ 0.23
SDF4-207ENST00000494748 GRAPLQ8TC17 118 aaPredicted RBP16.49■□□□□ 0.23
SDF4-207ENST00000494748 EURLQ9NYK6 297 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 STK38LQ9Y2H1 464 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 MSH4O15457 936 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 ACSL3O95573 720 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 GPSM2P81274 684 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 CCDC15Q0P6D6 951 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 ACVR2BQ13705 512 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 C1orf186Q6ZWK4 172 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 GDAP1Q8TB36 358 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 LRRC19Q9H756 370 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 RGL1Q9NZL6 768 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 DAGLAQ9Y4D2 1042 aa16.49■□□□□ 0.23
SDF4-207ENST00000494748 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 KIF3CO14782 793 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 UNC5CO95185 931 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 SLURP2P0DP57 97 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 ATP2A2P16615 1042 aaKnown RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 FOXN2P32314 431 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 ARHGEF19Q8IW93 802 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 PSPC1Q8WXF1 523 aaKnown RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 POLR3CQ9BUI4 534 aaPredicted RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 CTTNBP2NLQ9P2B4 639 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 ATMINO43313 823 aaPredicted RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 TCEA3O75764 348 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 MOV10L1Q9BXT6 1211 aaKnown RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 AGPAT3Q9NRZ7 376 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 WHRNQ9P202 907 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 LOXHD1Q8IVV2 1947 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 PASKQ96RG2 1323 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 GM2AP17900 193 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 MYL7Q01449 175 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 MTFR1Q15390 333 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 CAPRIN2Q6IMN6 1127 aaKnown RBP16.48■□□□□ 0.23
SDF4-207ENST00000494748 ERMNQ8TAM6 284 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 CYP2W1Q8TAV3 490 aa16.48■□□□□ 0.23
SDF4-207ENST00000494748 BTBD6Q96KE9 485 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms