RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 PLS1Q14651 629 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 USH1GQ495M9 461 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 ICE2Q659A1 982 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 DENND2CQ68D51 928 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 CLEC10AQ8IUN9 316 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 CNPY4Q8N129 248 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 SLC35G2Q8TBE7 412 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 MYCBPAPQ8TBZ2 947 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 ZNF473Q8WTR7 871 aaKnown RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 UBLCP1Q8WVY7 318 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 HOOK2Q96ED9 719 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 STRA6Q9BX79 667 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 VEZTQ9HBM0 779 aa12.39□□□□□ -0.43
RFC4-214ENST00000494047 ZNF70Q9UC06 446 aaPredicted RBP12.39□□□□□ -0.43
RFC4-214ENST00000494047 H0YGN5 161 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 TRAPPC3O43617 180 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 AGTP01019 485 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 MYBL1P10243 752 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 ACTN1P12814 892 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CTNNA2P26232 953 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 ECHS1P30084 290 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CTCFP49711 727 aaPredicted RBP12.38□□□□□ -0.43
RFC4-214ENST00000494047 JAK3P52333 1124 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 SMTNP53814 917 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 MFAP3P55082 362 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 PSMC6P62333 389 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 ZNF844Q08AG5 666 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 TTLL12Q14166 644 aaPredicted RBP12.38□□□□□ -0.43
RFC4-214ENST00000494047 SWT1Q5T5J6 900 aaKnown RBP12.38□□□□□ -0.43
RFC4-214ENST00000494047 B3GNT9Q6UX72 402 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 DLK2Q6UY11 383 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CCDC121Q6ZUS5 278 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 ZNF677Q86XU0 584 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 TPH2Q8IWU9 490 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 XXYLT1Q8NBI6 393 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 GRK7Q8WTQ7 553 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 SLCO2A1Q92959 643 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 DYDC2Q96IM9 177 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CABS1Q96KC9 395 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CSRNP1Q96S65 589 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CCT8L2Q96SF2 557 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 AGPAT1Q99943 283 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 PABPC3Q9H361 631 aaKnown RBP12.38□□□□□ -0.43
RFC4-214ENST00000494047 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.38□□□□□ -0.43
RFC4-214ENST00000494047 A1CFQ9NQ94 594 aaKnown RBP12.38□□□□□ -0.43
RFC4-214ENST00000494047 EHD2Q9NZN4 543 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 SLC12A6Q9UHW9 1150 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 GTF3C4Q9UKN8 822 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 NFS1Q9Y697 457 aa12.38□□□□□ -0.43
RFC4-214ENST00000494047 CLRN2A0PK11 232 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 DDTLA6NHG4 134 aaPredicted RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 K7ENM7 598 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 IPO5O00410 1097 aaKnown RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 TRIM66O15016 1216 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 GH2P01242 217 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 SLC10A3P09131 477 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 FAM153BP0C7A2 387 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 GHRP10912 638 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 PLS3P13797 630 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 POU5F1Q01860 360 aaKnown RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 CYP4A11Q02928 519 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 GRM1Q13255 1194 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 CYP1B1Q16678 543 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 FAM153CQ494X1 144 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 KIAA1755Q5JYT7 1200 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 DUPD1Q68J44 220 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 FAM83AQ86UY5 434 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 PRPF38AQ8NAV1 312 aaKnown RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 BBOF1Q8ND07 529 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 FAM151AQ8WW52 585 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 LPAR1Q92633 364 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 MXRA8Q9BRK3 442 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 LXNQ9BS40 222 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 FOXP3Q9BZS1 431 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 DDX47Q9H0S4 455 aaKnown RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 TDRD3Q9H7E2 651 aaKnown RBP12.37□□□□□ -0.43
RFC4-214ENST00000494047 VCPKMTQ9H867 229 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 YY1AP1Q9H869 796 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 SMARCAL1Q9NZC9 954 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 FAM153AQ9UHL3 310 aa12.37□□□□□ -0.43
RFC4-214ENST00000494047 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 E7EVH7 732 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 DDX3YO15523 660 aaKnown RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 CFBP00751 764 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 SLC1A1P43005 524 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 IREB2P48200 963 aaKnown RBP12.36□□□□□ -0.43
RFC4-214ENST00000494047 CASP4P49662 377 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 MXI1P50539 228 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 DNA2P51530 1060 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 HSD17B4P51659 736 aa12.36□□□□□ -0.43
RFC4-214ENST00000494047 VAMP7P51809 220 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms