RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 DMP1Q13316 513 aaPredicted RBP24.96■■□□□ 1.59
SNIP1-203ENST00000493916 CCSER1Q9C0I3 900 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 RNF39Q9H2S5 420 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 NXF3Q9H4D5 531 aaKnown RBP24.96■■□□□ 1.59
SNIP1-203ENST00000493916 PDZD7Q9H5P4 517 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 PUF60Q9UHX1 559 aaKnown RBP24.96■■□□□ 1.59
SNIP1-203ENST00000493916 GIT1Q9Y2X7 761 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 HES2Q9Y543 173 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 SRPRBQ9Y5M8 271 aaKnown RBP24.96■■□□□ 1.59
SNIP1-203ENST00000493916 TTLL13PA6NNM8 815 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 EDN1P05305 212 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 BMP1P13497 986 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 KCNQ1P51787 676 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 AFF1P51825 1210 aaKnown RBP24.95■■□□□ 1.58
SNIP1-203ENST00000493916 PEX3P56589 373 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 CTC1Q2NKJ3 1217 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 CDR2LQ86X02 465 aaPredicted RBP24.95■■□□□ 1.58
SNIP1-203ENST00000493916 USP28Q96RU2 1077 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 ARHGAP28Q9P2N2 729 aa24.95■■□□□ 1.58
SNIP1-203ENST00000493916 ARL5CA6NH57 179 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 CCDC169A6NNP5 214 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 PLCG1P19174 1290 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 MARCKSP29966 332 aaPredicted RBP24.94■■□□□ 1.58
SNIP1-203ENST00000493916 KARSQ15046 597 aaKnown RBP24.94■■□□□ 1.58
SNIP1-203ENST00000493916 LEXMQ3ZCV2 418 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 ADGRD2Q7Z7M1 963 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 LRRC15Q8TF66 581 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 TMEM134Q9H6X4 195 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 BLOC1S4Q9NUP1 217 aa24.94■■□□□ 1.58
SNIP1-203ENST00000493916 MYH15Q9Y2K3 1946 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 B4GALT3O60512 393 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 GALTP07902 379 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 LIG1P18858 919 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 KCNA5P22460 613 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 MLH1P40692 756 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 NASPP49321 788 aaPredicted RBP24.93■■□□□ 1.58
SNIP1-203ENST00000493916 ERVFC1P60507 584 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 CEBPZQ03701 1054 aaKnown RBP24.93■■□□□ 1.58
SNIP1-203ENST00000493916 SLC39A14Q15043 492 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 ZNF280BQ86YH2 543 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 RASSF8Q8NHQ8 419 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 SPIRE2Q8WWL2 714 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 GAD1Q99259 594 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 TMEM175Q9BSA9 504 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 NTPCRQ9BSD7 190 aaKnown RBP24.93■■□□□ 1.58
SNIP1-203ENST00000493916 KMT5AQ9NQR1 393 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 CLDND1Q9NY35 253 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 DNAJB4Q9UDY4 337 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 KCNG1Q9UIX4 513 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 RBM19Q9Y4C8 960 aaKnown RBP24.93■■□□□ 1.58
SNIP1-203ENST00000493916 PCDHGC5Q9Y5F6 944 aa24.93■■□□□ 1.58
SNIP1-203ENST00000493916 K7ERI5 159 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 DDHD2O94830 711 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 POMCP01189 267 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 PLS3P13797 630 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 SLC11A1P49279 550 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 TMEM132AQ24JP5 1023 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 ARSHQ5FYA8 562 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 NT5DC1Q5TFE4 455 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 TMEM173Q86WV6 379 aaPredicted RBP24.92■■□□□ 1.58
SNIP1-203ENST00000493916 MICAL1Q8TDZ2 1067 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 ADAMTS19Q8TE59 1207 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 RAD54LQ92698 747 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 TMEM169Q96HH4 297 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 IGSF21Q96ID5 467 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 EPSTI1Q96J88 318 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 FAM193BQ96PV7 902 aaPredicted RBP24.92■■□□□ 1.58
SNIP1-203ENST00000493916 TCF25Q9BQ70 676 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 ADPGKQ9BRR6 497 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 APOL6Q9BWW8 343 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 GBP3Q9H0R5 595 aa24.92■■□□□ 1.58
SNIP1-203ENST00000493916 NGRNQ9NPE2 291 aaKnown RBP24.92■■□□□ 1.58
SNIP1-203ENST00000493916 FSD2A1L4K1 749 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 NT5C1B-RDH14C9J2C7 533 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 AKAP5P24588 427 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 GTF2F1P35269 517 aaKnown RBP eCLIP24.91■■□□□ 1.58
SNIP1-203ENST00000493916 RAD51AP2Q09MP3 1159 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 DCAF4L1Q3SXM0 396 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 ATF7IP2Q5U623 682 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 EFHBQ8N7U6 833 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 ZFP42Q96MM3 310 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 CDCA3Q99618 268 aaPredicted RBP24.91■■□□□ 1.58
SNIP1-203ENST00000493916 ENTPD7Q9NQZ7 604 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 ODF2LQ9ULJ1 636 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 CUL9Q8IWT3 2517 aa24.91■■□□□ 1.58
SNIP1-203ENST00000493916 ZSCAN22P10073 491 aaPredicted RBP24.9■■□□□ 1.58
SNIP1-203ENST00000493916 LTBRP36941 435 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 NRIP1P48552 1158 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 SCNN1GP51170 649 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 DSC1Q08554 894 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 PLPP4Q5VZY2 271 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 EEF1DP3Q658K8 133 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 USP49Q70CQ1 688 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 TAS1R3Q7RTX0 852 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 APBB1IPQ7Z5R6 666 aaPredicted RBP24.9■■□□□ 1.58
SNIP1-203ENST00000493916 GPBP1Q86WP2 473 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 KRI1Q8N9T8 703 aaKnown RBP24.9■■□□□ 1.58
SNIP1-203ENST00000493916 GSTCDQ8NEC7 633 aa24.9■■□□□ 1.58
SNIP1-203ENST00000493916 BCL7CQ8WUZ0 217 aaPredicted RBP24.9■■□□□ 1.58
SNIP1-203ENST00000493916 ZNF396Q96N95 335 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms