RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 NFASCO94856 1347 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 MYO15AQ9UKN7 3530 aa13.53□□□□□ -0.24
UPF3A-210ENST00000493727 TCHHQ07283 1943 aa13.52□□□□□ -0.24
UPF3A-210ENST00000493727 M0QZ92 97 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 GADD45BO75293 160 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-210ENST00000493727 UPP2O95045 317 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 CHRNA1P02708 482 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 LINC00271P0C7V0 271 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 MARK3P27448 753 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 RELBQ01201 579 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 GRIN1Q05586 938 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-210ENST00000493727 IL17AQ16552 155 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 OXLD1Q5BKU9 147 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 C6orf118Q5T5N4 469 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 ADALQ6DHV7 355 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 FAM43BQ6ZT52 329 aaPredicted RBP13.52□□□□□ -0.25
UPF3A-210ENST00000493727 FSIP1Q8NA03 581 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 ERMNQ8TAM6 284 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 MRPS27Q92552 414 aaKnown RBP13.52□□□□□ -0.25
UPF3A-210ENST00000493727 FBXL18Q96ME1 805 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 RIT2Q99578 217 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 KCNH6Q9H252 994 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
UPF3A-210ENST00000493727 LRWD1Q9UFC0 647 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 PRKAG3Q9UGI9 489 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 SQORQ9Y6N5 450 aa13.52□□□□□ -0.25
UPF3A-210ENST00000493727 WDR81Q562E7 1941 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 KIAA1671Q9BY89 1806 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 A0A1W2PQ27 194 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 A0A1W2PQ64 194 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 A0A1W2PQD8 194 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 SPINT1O43278 529 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 GHRP10912 638 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 BMP2P12643 396 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 LTBRP36941 435 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 UBA7P41226 1012 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 PTGIRP43119 386 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 SLC26A2P50443 739 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 MRPS6P82932 125 aaKnown RBP13.51□□□□□ -0.25
UPF3A-210ENST00000493727 MGAT3Q09327 533 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 USP4Q13107 963 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 GPM6BQ13491 265 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 NFKBIBQ15653 356 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 ZRSR1Q15695 479 aaKnown RBP13.51□□□□□ -0.25
UPF3A-210ENST00000493727 SPECC1Q5M775 1068 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 AXDND1Q5T1B0 1012 aaPredicted RBP13.51□□□□□ -0.25
UPF3A-210ENST00000493727 IER5Q5VY09 327 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 RUFY4Q6ZNE9 571 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 TSHZ1Q6ZSZ6 1077 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 PLPPR4Q7Z2D5 763 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 ADHFE1Q8IWW8 467 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 TMEM192Q8IY95 271 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 FIBCD1Q8N539 461 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 CDK5RAP3Q96JB5 506 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 AK8Q96MA6 479 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 UNC45AQ9H3U1 944 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 RC3H2Q9HBD1 1191 aaKnown RBP13.51□□□□□ -0.25
UPF3A-210ENST00000493727 LMBRD1Q9NUN5 540 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 VAV3Q9UKW4 847 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 TELO2Q9Y4R8 837 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 SAMM50Q9Y512 469 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 CDY2AQ9Y6F7 541 aa13.51□□□□□ -0.25
UPF3A-210ENST00000493727 C5orf67F2Z3F1 127 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 ATP9BO43861 1147 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 PSMD10O75832 226 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 RB1P06400 928 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 INSRRP14616 1297 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 STAT5BP51692 787 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 KRT76Q01546 638 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 PPP2R5CQ13362 524 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 LPIN1Q14693 890 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 FBXO47Q5MNV8 452 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 KRT79Q5XKE5 535 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 HAUS3Q68CZ6 603 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 MIER3Q7Z3K6 550 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 DNAJB3Q8WWF6 145 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 FTHL17Q9BXU8 183 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 LMAN2LQ9H0V9 348 aa13.5□□□□□ -0.25
UPF3A-210ENST00000493727 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 WDR64B1ANS9 1081 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 NCK2O43639 380 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 MBD3O95983 291 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 CMA1P23946 247 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 SFNP31947 248 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 IRS1P35568 1242 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 CCT6AP40227 531 aaKnown RBP13.49□□□□□ -0.25
UPF3A-210ENST00000493727 JAK3P52333 1124 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 ACTR2P61160 394 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 IGBP1P78318 339 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 PDIA5Q14554 519 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 SMAD2Q15796 467 aaKnown RBP13.49□□□□□ -0.25
UPF3A-210ENST00000493727 MARCH8Q5T0T0 291 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 RESP18Q5W5W9 173 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 ZNF787Q6DD87 383 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 ZNF746Q6NUN9 644 aaPredicted RBP13.49□□□□□ -0.25
UPF3A-210ENST00000493727 SHC4Q6S5L8 630 aa13.49□□□□□ -0.25
UPF3A-210ENST00000493727 HFE2Q6ZVN8 426 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms