RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 GJB2P29033 226 aa15.02■□□□□ -0
IRF1-210ENST00000493208 HOXA11P31270 313 aaPredicted RBP15.02■□□□□ -0
IRF1-210ENST00000493208 DMP1Q13316 513 aaPredicted RBP15.02■□□□□ -0
IRF1-210ENST00000493208 FAM187BQ17R55 369 aa15.02■□□□□ -0
IRF1-210ENST00000493208 DCAF4L1Q3SXM0 396 aa15.02■□□□□ -0
IRF1-210ENST00000493208 LONRF3Q496Y0 759 aa15.02■□□□□ -0
IRF1-210ENST00000493208 ARL6IP4Q66PJ3 421 aaKnown RBP15.02■□□□□ -0
IRF1-210ENST00000493208 KIAA1841Q6NSI8 718 aa15.02■□□□□ -0
IRF1-210ENST00000493208 MAEAQ7L5Y9 396 aa15.02■□□□□ -0
IRF1-210ENST00000493208 MSLNLQ96KJ4 702 aa15.02■□□□□ -0
IRF1-210ENST00000493208 RIPOR3Q96MK2 946 aa15.02■□□□□ -0
IRF1-210ENST00000493208 BHMT2Q9H2M3 363 aa15.02■□□□□ -0
IRF1-210ENST00000493208 NRDE2Q9H7Z3 1164 aa15.02■□□□□ -0
IRF1-210ENST00000493208 MINDY3Q9H8M7 445 aa15.02■□□□□ -0
IRF1-210ENST00000493208 KIAA1024Q9UPX6 916 aa15.02■□□□□ -0
IRF1-210ENST00000493208 A0A1B0GUA9 196 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 H0YCG3 227 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 LINC01565O15544 149 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 ARF4P18085 180 aaPredicted RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 SCP2P22307 547 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 GTF2F1P35269 517 aaKnown RBP eCLIP15.01□□□□□ -0.01
IRF1-210ENST00000493208 SMTNP53814 917 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 GRIK3Q13003 919 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 LARP1BQ659C4 914 aaKnown RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 CDCA2Q69YH5 1023 aaPredicted RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 ANKRD54Q6NXT1 300 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 AGMOQ6ZNB7 445 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 BRAPQ7Z569 592 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 IGSF22Q8N9C0 903 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 RASSF8Q8NHQ8 419 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 ASAP3Q8TDY4 903 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 AK8Q96MA6 479 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 TBC1D32Q96NH3 1257 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 PHF7Q9BWX1 381 aaPredicted RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 DDX19AQ9NUU7 478 aaKnown RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 KCND2Q9NZV8 630 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 PARP2Q9UGN5 583 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 BARX2Q9UMQ3 279 aaPredicted RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
IRF1-210ENST00000493208 NCOR1O75376 2440 aa15.01□□□□□ -0.01
IRF1-210ENST00000493208 XIRP2A4UGR9 3374 aa15□□□□□ -0.01
IRF1-210ENST00000493208 C2orf71A6NGG8 1288 aa15□□□□□ -0.01
IRF1-210ENST00000493208 ARL5CA6NH57 179 aa15□□□□□ -0.01
IRF1-210ENST00000493208 NT5C1B-RDH14C9J2C7 533 aa15□□□□□ -0.01
IRF1-210ENST00000493208 INPPL1O15357 1258 aa15□□□□□ -0.01
IRF1-210ENST00000493208 GPR37L1O60883 481 aa15□□□□□ -0.01
IRF1-210ENST00000493208 POMCP01189 267 aa15□□□□□ -0.01
IRF1-210ENST00000493208 PRKCBP05771 671 aa15□□□□□ -0.01
IRF1-210ENST00000493208 ABCD1P33897 745 aa15□□□□□ -0.01
IRF1-210ENST00000493208 PBX3P40426 434 aa15□□□□□ -0.01
IRF1-210ENST00000493208 MTHFRP42898 656 aa15□□□□□ -0.01
IRF1-210ENST00000493208 OR1G1P47890 313 aa15□□□□□ -0.01
IRF1-210ENST00000493208 DLX2Q07687 328 aaPredicted RBP15□□□□□ -0.01
IRF1-210ENST00000493208 CALML4Q96GE6 196 aa15□□□□□ -0.01
IRF1-210ENST00000493208 CPB2Q96IY4 423 aa15□□□□□ -0.01
IRF1-210ENST00000493208 APOL6Q9BWW8 343 aa15□□□□□ -0.01
IRF1-210ENST00000493208 ZBP1Q9H171 429 aa15□□□□□ -0.01
IRF1-210ENST00000493208 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15□□□□□ -0.01
IRF1-210ENST00000493208 CLEC1BQ9P126 229 aa15□□□□□ -0.01
IRF1-210ENST00000493208 HCSTQ9UBK5 93 aa15□□□□□ -0.01
IRF1-210ENST00000493208 USP15Q9Y4E8 981 aaPredicted RBP15□□□□□ -0.01
IRF1-210ENST00000493208 PCDHB6Q9Y5E3 794 aa15□□□□□ -0.01
IRF1-210ENST00000493208 TCF20Q9UGU0 1960 aaKnown RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 C19orf67A6NJJ6 358 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 K7ERI5 159 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 ACKR2O00590 384 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 WNT7AO00755 349 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 NPTXRO95502 500 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 ADH1AP07327 375 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 COL9A1P20849 921 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 MLH1P40692 756 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 YARSP54577 528 aaKnown RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 ELAVL2Q12926 359 aaKnown RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 STRN3Q13033 797 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 CBX2Q14781 532 aaPredicted RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 UBXN11Q5T124 520 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 LLGL2Q6P1M3 1020 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 PDXDC1Q6P996 788 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 CABP7Q86V35 215 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 GAD1Q99259 594 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 FZD8Q9H461 694 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 TOPORSQ9NS56 1045 aaPredicted RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.99□□□□□ -0.01
IRF1-210ENST00000493208 KIAA1671Q9BY89 1806 aa14.99□□□□□ -0.01
IRF1-210ENST00000493208 SPTBN5Q9NRC6 3674 aaKnown RBP14.98□□□□□ -0.01
IRF1-210ENST00000493208 CCDC169A6NNP5 214 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 HIDE1A8MVS5 230 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 PRR33A8MZF0 331 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 NRP1O14786 923 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 SOD2P04179 222 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 LIG1P18858 919 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 KLRC2P26717 231 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 UBA7P41226 1012 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 SLC11A1P49279 550 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 ZRSR1Q15695 479 aaKnown RBP14.98□□□□□ -0.01
IRF1-210ENST00000493208 ATAT1Q5SQI0 421 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 GPR65Q8IYL9 337 aa14.98□□□□□ -0.01
IRF1-210ENST00000493208 SMG8Q8ND04 991 aaKnown RBP14.98□□□□□ -0.01
IRF1-210ENST00000493208 EIF2AQ9BY44 585 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms