RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 MLH1P40692 756 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 PRPHP41219 470 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 RILPL1Q5EBL4 403 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 LLGL2Q6P1M3 1020 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 DDX53Q86TM3 631 aaKnown RBP19.95■□□□□ 0.78
PTPRU-207ENST00000492954 ZBTB8OSQ8IWT0 167 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 AUTS2Q8WXX7 1259 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 FAM193BQ96PV7 902 aaPredicted RBP19.95■□□□□ 0.78
PTPRU-207ENST00000492954 GAD1Q99259 594 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 TRIM6Q9C030 488 aaPredicted RBP19.95■□□□□ 0.78
PTPRU-207ENST00000492954 ZBP1Q9H171 429 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 UBN1Q9NPG3 1134 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 KANSL3Q9P2N6 904 aa19.95■□□□□ 0.78
PTPRU-207ENST00000492954 USP15Q9Y4E8 981 aaPredicted RBP19.95■□□□□ 0.78
PTPRU-207ENST00000492954 ARL5CA6NH57 179 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 NPTXRO95502 500 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 CXCL14O95715 111 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 CDC25AP30304 524 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 DTHD1Q6ZMT9 781 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 PPP4R3CPQ6ZMV5 832 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 ZFP42Q96MM3 310 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 TMEM175Q9BSA9 504 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 VN1R3Q9BXE9 311 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 C1QTNF1Q9BXJ1 281 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 C2orf40Q9H1Z8 148 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 FZD8Q9H461 694 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.94■□□□□ 0.78
PTPRU-207ENST00000492954 STK24Q9Y6E0 443 aa19.94■□□□□ 0.78
PTPRU-207ENST00000492954 A0A1B0GUA9 196 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 TTLL13PA6NNM8 815 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 INPPL1O15357 1258 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 CTSAP10619 480 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 AKAP5P24588 427 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 NAMPTP43490 491 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 SCNN1GP51170 649 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 ATP2C1P98194 919 aaPredicted RBP19.93■□□□□ 0.78
PTPRU-207ENST00000492954 FAM187BQ17R55 369 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 KRT79Q5XKE5 535 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 SLC27A1Q6PCB7 646 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 TMEM184AQ6ZMB5 413 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 PRIMPOLQ96LW4 560 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 MMTAG2Q9BU76 263 aaKnown RBP19.93■□□□□ 0.78
PTPRU-207ENST00000492954 KIFC3Q9BVG8 833 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 PRMT7Q9NVM4 692 aaPredicted RBP19.93■□□□□ 0.78
PTPRU-207ENST00000492954 MIOSQ9NXC5 875 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 FAN1Q9Y2M0 1017 aa19.93■□□□□ 0.78
PTPRU-207ENST00000492954 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.92■□□□□ 0.78
PTPRU-207ENST00000492954 E9PMD0 336 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 PI4K2BG5E9Z4 385 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 NRP1O14786 923 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 CLASP2O75122 1294 aaKnown RBP19.92■□□□□ 0.78
PTPRU-207ENST00000492954 ALDH2P05091 517 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 PRKCBP05771 671 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 SRGAP2BP0DMP2 458 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 LIG1P18858 919 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 BMS1Q14692 1282 aaKnown RBP19.92■□□□□ 0.78
PTPRU-207ENST00000492954 MAPK6Q16659 721 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 LARP1BQ659C4 914 aaKnown RBP19.92■□□□□ 0.78
PTPRU-207ENST00000492954 ANKRD54Q6NXT1 300 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 HACE1Q8IYU2 909 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 DEPTORQ8TB45 409 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 KIFAP3Q92845 792 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 POP1Q99575 1024 aaKnown RBP19.92■□□□□ 0.78
PTPRU-207ENST00000492954 APOL5Q9BWW9 433 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 CCDC113Q9H0I3 377 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 DNM3Q9UQ16 869 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 USP20Q9Y2K6 914 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 GIT1Q9Y2X7 761 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 HCFC2Q9Y5Z7 792 aa19.92■□□□□ 0.78
PTPRU-207ENST00000492954 EDN1P05305 212 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 PPP2R5AQ15172 486 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 TMEM132AQ24JP5 1023 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 SYCE2Q6PIF2 218 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 KCNK18Q7Z418 384 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 COLGALT2Q8IYK4 626 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 IFT74Q96LB3 600 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 PDZD7Q9H5P4 517 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 MARCH5Q9NX47 278 aa19.91■□□□□ 0.78
PTPRU-207ENST00000492954 PRG3Q9Y2Y8 225 aaPredicted RBP19.91■□□□□ 0.78
PTPRU-207ENST00000492954 FAM86C2PA6NEL3 165 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 N4BP3O15049 544 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 OR1G1P47890 313 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 DSC1Q08554 894 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 PRPF4BQ13523 1007 aaKnown RBP19.9■□□□□ 0.78
PTPRU-207ENST00000492954 ZRSR1Q15695 479 aaKnown RBP19.9■□□□□ 0.78
PTPRU-207ENST00000492954 SUSD6Q92537 303 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 CASP10Q92851 521 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 RUSC1Q9BVN2 902 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 S1PR5Q9H228 398 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 KLK14Q9P0G3 267 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 PARP2Q9UGN5 583 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 IRAK3Q9Y616 596 aa19.9■□□□□ 0.78
PTPRU-207ENST00000492954 VWA3AA6NCI4 1184 aa19.89■□□□□ 0.77
PTPRU-207ENST00000492954 F8W810 466 aa19.89■□□□□ 0.77
PTPRU-207ENST00000492954 ACKR2O00590 384 aa19.89■□□□□ 0.77
PTPRU-207ENST00000492954 SSBP05455 408 aaKnown RBP eCLIP19.89■□□□□ 0.77
PTPRU-207ENST00000492954 COL9A1P20849 921 aa19.89■□□□□ 0.77
PTPRU-207ENST00000492954 CUL4AQ13619 759 aa19.89■□□□□ 0.77
PTPRU-207ENST00000492954 PTPN14Q15678 1187 aa19.89■□□□□ 0.77
PTPRU-207ENST00000492954 TMEM87AQ8NBN3 555 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms