RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 SLC9A9Q8IVB4 645 aa24.1■■□□□ 1.45
PSPC1-204ENST00000492741 C12orf56Q8IXR9 622 aa24.1■■□□□ 1.45
PSPC1-204ENST00000492741 ZC3H3Q8IXZ2 948 aaKnown RBP24.1■■□□□ 1.45
PSPC1-204ENST00000492741 DIS3LQ8TF46 1054 aaKnown RBP24.1■■□□□ 1.45
PSPC1-204ENST00000492741 TTLL13PA6NNM8 815 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 TLR3O15455 904 aaKnown RBP24.09■■□□□ 1.45
PSPC1-204ENST00000492741 CLDN3O15551 220 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 B4GALT5O43286 388 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 PQBP1O60828 265 aaKnown RBP24.09■■□□□ 1.45
PSPC1-204ENST00000492741 GARTP22102 1010 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 SFPQP23246 707 aaKnown RBP eCLIP24.09■■□□□ 1.451e-7■□□□□ 8.6
PSPC1-204ENST00000492741 EEF1GP26641 437 aaKnown RBP24.09■■□□□ 1.45
PSPC1-204ENST00000492741 ADSSP30520 456 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 ATF7IP2Q5U623 682 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 XXYLT1Q8NBI6 393 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 RDH13Q8NBN7 331 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 ZBTB45Q96K62 511 aaPredicted RBP24.09■■□□□ 1.45
PSPC1-204ENST00000492741 DMAC2Q9NW81 257 aa24.09■■□□□ 1.45
PSPC1-204ENST00000492741 TULP1O00294 542 aaPredicted RBP24.08■■□□□ 1.45
PSPC1-204ENST00000492741 TOM1L1O75674 476 aa24.08■■□□□ 1.45
PSPC1-204ENST00000492741 TPM2P07951 284 aa24.08■■□□□ 1.45
PSPC1-204ENST00000492741 CAPN2P17655 700 aa24.08■■□□□ 1.45
PSPC1-204ENST00000492741 PSMC2P35998 433 aaKnown RBP24.08■■□□□ 1.45
PSPC1-204ENST00000492741 DHX38Q92620 1227 aaKnown RBP24.08■■□□□ 1.45
PSPC1-204ENST00000492741 AKAP3O75969 853 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 CHRNA1P02708 482 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 HARSP12081 509 aaKnown RBP24.07■■□□□ 1.44
PSPC1-204ENST00000492741 CASP4P49662 377 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 UBASH3AP57075 661 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 PCBP1Q15365 356 aaKnown RBP eCLIP24.07■■□□□ 1.44
PSPC1-204ENST00000492741 TSHZ1Q6ZSZ6 1077 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 ZBTB33Q86T24 672 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 FAM126BQ8IXS8 530 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 TMEM40Q8WWA1 233 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 SAAL1Q96ER3 474 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 CPB2Q96IY4 423 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 PAWRQ96IZ0 340 aaKnown RBP24.07■■□□□ 1.44
PSPC1-204ENST00000492741 C11orf49Q9H6J7 331 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 GOLGA8IPA6NC78 632 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 GOLGA8JA6NMD2 632 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 PES1O00541 588 aaKnown RBP24.07■■□□□ 1.44
PSPC1-204ENST00000492741 PRKCSHP14314 528 aaPredicted RBP24.07■■□□□ 1.44
PSPC1-204ENST00000492741 KRT31Q15323 416 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 AMHR2Q16671 573 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 FAM186BQ8IYM0 893 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 MSTO1Q9BUK6 570 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 IFNKQ9P0W0 207 aa24.07■■□□□ 1.44
PSPC1-204ENST00000492741 AGO2Q9UKV8 859 aaKnown RBP24.07■■□□□ 1.44
PSPC1-204ENST00000492741 CNTNAP2Q9UHC6 1331 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 DCDC2CA8MYV0 355 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 SLC16A3O15427 465 aaKnown RBP24.06■■□□□ 1.44
PSPC1-204ENST00000492741 AP5Z1O43299 807 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 TSPAN1O60635 241 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 ARF4P18085 180 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-204ENST00000492741 FILIP1LQ4L180 1135 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 ZNF618Q5T7W0 954 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 SARM1Q6SZW1 724 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 CDR2LQ86X02 465 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-204ENST00000492741 CCDC155Q8N6L0 562 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 TUBGCP2Q9BSJ2 902 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 VPS16Q9H269 839 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 TAB2Q9NYJ8 693 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 ARMCX3Q9UH62 379 aaPredicted RBP24.06■■□□□ 1.44
PSPC1-204ENST00000492741 LIMA1Q9UHB6 759 aaKnown RBP24.06■■□□□ 1.44
PSPC1-204ENST00000492741 TNFSF13BQ9Y275 285 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 STYXL1Q9Y6J8 313 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 SIP14410 1827 aa24.06■■□□□ 1.44
PSPC1-204ENST00000492741 KIAA0391O15091 583 aaKnown RBP24.05■■□□□ 1.44
PSPC1-204ENST00000492741 CAND2O75155 1236 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 COL6A1P12109 1028 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 CKBP12277 381 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 MGAT3Q09327 533 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 TRIM71Q2Q1W2 868 aaKnown RBP24.05■■□□□ 1.44
PSPC1-204ENST00000492741 ZNF568Q3ZCX4 644 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 MPZL3Q6UWV2 235 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 NECAB2Q7Z6G3 386 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 GPD1LQ8N335 351 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 TMEM174Q8WUU8 243 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 MKNK1Q9BUB5 465 aa24.05■■□□□ 1.44
PSPC1-204ENST00000492741 METTL14Q9HCE5 456 aaKnown RBP24.05■■□□□ 1.44
PSPC1-204ENST00000492741 A0A0B4J269 797 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 CBFA2T2O43439 604 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 RPS6KA5O75582 802 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 LDHAP00338 332 aaKnown RBP24.04■■□□□ 1.44
PSPC1-204ENST00000492741 CD4P01730 458 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 BFSP2Q13515 415 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 FRMD5Q7Z6J6 570 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 CAGE1Q8TC20 777 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 ADPGKQ9BRR6 497 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 FAM213AQ9BRX8 229 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 NOC4LQ9BVI4 516 aaKnown RBP24.04■■□□□ 1.44
PSPC1-204ENST00000492741 NOC2LQ9Y3T9 749 aaKnown RBP24.04■■□□□ 1.44
PSPC1-204ENST00000492741 N4BP3O15049 544 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 ADCY5O95622 1261 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 TPM3P06753 285 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 COPB1P53618 953 aaKnown RBP24.04■■□□□ 1.44
PSPC1-204ENST00000492741 HSP90AA2PQ14568 343 aaPredicted RBP24.04■■□□□ 1.44
PSPC1-204ENST00000492741 NOLC1Q14978 699 aaKnown RBP eCLIP24.04■■□□□ 1.44
PSPC1-204ENST00000492741 ZSWIM2Q8NEG5 633 aa24.04■■□□□ 1.44
PSPC1-204ENST00000492741 HAPLN2Q9GZV7 340 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms