RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 UBN1Q9NPG3 1134 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 PRKAG3Q9UGI9 489 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 STK24Q9Y6E0 443 aa16.6■□□□□ 0.25
TOM1-215ENST00000491987 CARNS1A5YM72 827 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 C2orf71A6NGG8 1288 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 EYA4O95677 639 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 LIG1P18858 919 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 CDC25AP30304 524 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 NAMPTP43490 491 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 ATP2C1P98194 919 aaPredicted RBP16.59■□□□□ 0.25
TOM1-215ENST00000491987 KRT79Q5XKE5 535 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 SLC27A1Q6PCB7 646 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 ADHFE1Q8IWW8 467 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 VPS52Q8N1B4 723 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 MRPL43Q8N983 215 aaKnown RBP16.59■□□□□ 0.25
TOM1-215ENST00000491987 PRIMPOLQ96LW4 560 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 GAD1Q99259 594 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 ZBP1Q9H171 429 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 C2orf40Q9H1Z8 148 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 PRMT7Q9NVM4 692 aaPredicted RBP16.59■□□□□ 0.25
TOM1-215ENST00000491987 KANSL3Q9P2N6 904 aa16.59■□□□□ 0.25
TOM1-215ENST00000491987 A0A1B0GUA9 196 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.58■□□□□ 0.24
TOM1-215ENST00000491987 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 E9PMD0 336 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 CXCL14O95715 111 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 SRGAP2BP0DMP2 458 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 SCNN1GP51170 649 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 KCNC3Q14003 757 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 BMS1Q14692 1282 aaKnown RBP16.58■□□□□ 0.24
TOM1-215ENST00000491987 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 LARP1BQ659C4 914 aaKnown RBP16.58■□□□□ 0.24
TOM1-215ENST00000491987 DDX53Q86TM3 631 aaKnown RBP16.58■□□□□ 0.24
TOM1-215ENST00000491987 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 DEPTORQ8TB45 409 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 ZFP42Q96MM3 310 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 TMEM175Q9BSA9 504 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 KIFC3Q9BVG8 833 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 C1QTNF1Q9BXJ1 281 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 FZD8Q9H461 694 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 USP20Q9Y2K6 914 aa16.58■□□□□ 0.24
TOM1-215ENST00000491987 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
TOM1-215ENST00000491987 C19orf67A6NJJ6 358 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 TTLL13PA6NNM8 815 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 NRP1O14786 923 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 CLASP2O75122 1294 aaKnown RBP16.57■□□□□ 0.24
TOM1-215ENST00000491987 ALDH2P05091 517 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 PRKCBP05771 671 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 AKAP5P24588 427 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 PPP2R5AQ15172 486 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 ZRSR1Q15695 479 aaKnown RBP16.57■□□□□ 0.24
TOM1-215ENST00000491987 MAPK6Q16659 721 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 FAM187BQ17R55 369 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 ANKRD54Q6NXT1 300 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 KIFAP3Q92845 792 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 IFT74Q96LB3 600 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
TOM1-215ENST00000491987 MMTAG2Q9BU76 263 aaKnown RBP16.57■□□□□ 0.24
TOM1-215ENST00000491987 VN1R3Q9BXE9 311 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 CCDC113Q9H0I3 377 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 MIOSQ9NXC5 875 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 DNM3Q9UQ16 869 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 FAN1Q9Y2M0 1017 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 PRG3Q9Y2Y8 225 aaPredicted RBP16.57■□□□□ 0.24
TOM1-215ENST00000491987 HCFC2Q9Y5Z7 792 aa16.57■□□□□ 0.24
TOM1-215ENST00000491987 NCOR1O75376 2440 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 VWA3AA6NCI4 1184 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 INPPL1O15357 1258 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 EDN1P05305 212 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 CTSAP10619 480 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 OR1G1P47890 313 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 PRPF4BQ13523 1007 aaKnown RBP16.56■□□□□ 0.24
TOM1-215ENST00000491987 TMEM184AQ6ZMB5 413 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 KCNK18Q7Z418 384 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 COLGALT2Q8IYK4 626 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 CASP10Q92851 521 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 APOL5Q9BWW9 433 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 PDZD7Q9H5P4 517 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 KLK14Q9P0G3 267 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 PARP2Q9UGN5 583 aa16.56■□□□□ 0.24
TOM1-215ENST00000491987 PI4K2BG5E9Z4 385 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 N4BP3O15049 544 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 SSBP05455 408 aaKnown RBP eCLIP16.55■□□□□ 0.24
TOM1-215ENST00000491987 DSC1Q08554 894 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 CUL4AQ13619 759 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 SYCE2Q6PIF2 218 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 TMEM87AQ8NBN3 555 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 RUSC1Q9BVN2 902 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 MARCH5Q9NX47 278 aa16.55■□□□□ 0.24
TOM1-215ENST00000491987 VPS37CA5D8V6 355 aaPredicted RBP16.54■□□□□ 0.24
TOM1-215ENST00000491987 FAM86C2PA6NEL3 165 aa16.54■□□□□ 0.24
TOM1-215ENST00000491987 ACKR2O00590 384 aa16.54■□□□□ 0.24
TOM1-215ENST00000491987 PTPN14Q15678 1187 aa16.54■□□□□ 0.24
TOM1-215ENST00000491987 EEF1DP3Q658K8 133 aa16.54■□□□□ 0.24
TOM1-215ENST00000491987 DAW1Q8N136 415 aa16.54■□□□□ 0.24
TOM1-215ENST00000491987 GSTCDQ8NEC7 633 aa16.54■□□□□ 0.24
TOM1-215ENST00000491987 PNMA5Q96PV4 448 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms