RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 BLOC1S2Q6QNY1 142 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 MOXD1Q6UVY6 613 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 COLGALT2Q8IYK4 626 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 ZNF707Q96C28 371 aaPredicted RBP16.16■□□□□ 0.18
SSR4-212ENST00000491833 JAKMIP1Q96N16 626 aaKnown RBP16.16■□□□□ 0.18
SSR4-212ENST00000491833 PLEKHA4Q9H4M7 779 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 MINDY3Q9H8M7 445 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 ZDHHC7Q9NXF8 308 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 PCDHA4Q9UN74 947 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 SIT1Q9Y3P8 196 aa16.16■□□□□ 0.18
SSR4-212ENST00000491833 TDRD15B5MCY1 1934 aaKnown RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 GAS2O43903 313 aaKnown RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 NR1I2O75469 434 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 SRGAP2CP0DJJ0 459 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 HOXA11P31270 313 aaPredicted RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 MLH1P40692 756 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 RFC5P40937 340 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 QARSP47897 775 aaKnown RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 NPEPPSP55786 919 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 DSC1Q08554 894 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 PUM1Q14671 1186 aaKnown RBP eCLIP16.15■□□□□ 0.18
SSR4-212ENST00000491833 KIAA0319Q5VV43 1072 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 TAS1R1Q7RTX1 841 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 SMG8Q8ND04 991 aaKnown RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 RUBCNQ92622 972 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 CEP170P1Q96L14 293 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 MBOAT7Q96N66 472 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 DHX33Q9H6R0 707 aaKnown RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.15■□□□□ 0.18
SSR4-212ENST00000491833 BMP2KQ9NSY1 1161 aaPredicted RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.15■□□□□ 0.18
SSR4-212ENST00000491833 DLGAP2Q9P1A6 1054 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 DDX25Q9UHL0 483 aaKnown RBP16.15■□□□□ 0.18
SSR4-212ENST00000491833 IPPQ9Y573 584 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 ARID2Q68CP9 1835 aa16.15■□□□□ 0.18
SSR4-212ENST00000491833 FANCMQ8IYD8 2048 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 ARL5CA6NH57 179 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 PAPLNO95428 1278 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 EFEMP2O95967 443 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 C1RP00736 705 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 SP9P0CG40 484 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 LAMP2P13473 410 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 SCNN1GP51170 649 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 CREMQ03060 361 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 LAMTOR4Q0VGL1 99 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 HTR4Q13639 388 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 DCLRE1AQ6PJP8 1040 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 C1orf210Q8IVY1 113 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 FBXL16Q8N461 479 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 TCP11Q8WWU5 503 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.17
SSR4-212ENST00000491833 TMEM143Q96AN5 459 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 CCDC51Q96ER9 411 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 NT5C3AQ9H0P0 336 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 SLC2A4RGQ9NR83 387 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 NUMBLQ9Y6R0 609 aa16.14■□□□□ 0.17
SSR4-212ENST00000491833 EML1O00423 815 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 TGM5O43548 720 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 CDC45O75419 566 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 SPATA31D3P0C874 917 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 AXLP30530 894 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 PPP2R5CQ13362 524 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 EMC2Q15006 297 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 PCBP1Q15365 356 aaKnown RBP eCLIP16.13■□□□□ 0.171e-10■■■□□ 17.3
SSR4-212ENST00000491833 FUT10Q6P4F1 479 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 NOTUMQ6P988 496 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 SPATA31D4Q6ZUB0 917 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 SKAP1Q86WV1 359 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 PALB2Q86YC2 1186 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 DAGLBQ8NCG7 672 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 PJA1Q8NG27 643 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 GAD1Q99259 594 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 EIF2AQ9BY44 585 aaKnown RBP16.13■□□□□ 0.17
SSR4-212ENST00000491833 AGXT2Q9BYV1 514 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 PRKD2Q9BZL6 878 aa16.13■□□□□ 0.17
SSR4-212ENST00000491833 MTCL1Q9Y4B5 1905 aaKnown RBP16.13■□□□□ 0.17
SSR4-212ENST00000491833 MIA3Q5JRA6 1907 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 ANHXE9PGG2 379 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 F8W810 466 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 ASAP2O43150 1006 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 SLC37A4O43826 429 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 TSPAN1O60635 241 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 KINO60870 393 aaKnown RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 P4HBP07237 508 aaKnown RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 RPS6KB1P23443 525 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 CCT2P78371 535 aaKnown RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 USP41Q3LFD5 358 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 GLYCTKQ8IVS8 523 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 GPR65Q8IYL9 337 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 HACE1Q8IYU2 909 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 ZNF579Q8NAF0 562 aaKnown RBP16.12■□□□□ 0.17
SSR4-212ENST00000491833 SHDQ96IW2 340 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 ZFP42Q96MM3 310 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 LXNQ9BS40 222 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 COLEC11Q9BWP8 271 aa16.12■□□□□ 0.17
SSR4-212ENST00000491833 APOL6Q9BWW8 343 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms