RNA–Protein interactions for RNA: ENST00000491106.1

SNRNP40-207, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 459 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-207ENST00000491106 GNAI1P63096 354 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ALDH6A1Q02252 535 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 EXOSC9Q06265 439 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ADCY2Q08462 1091 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ADCY1Q08828 1119 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 TCIRG1Q13488 830 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 RIN1Q13671 783 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ANKRD45Q5TZF3 282 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 TRIM68Q6AZZ1 485 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 CC2D1AQ6P1N0 951 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 CHD1LQ86WJ1 897 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 NME9Q86XW9 330 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 HSCBQ8IWL3 235 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 FTSJ3Q8IY81 847 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 LILRB2Q8N423 598 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 C7orf31Q8N865 590 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 KIAA1958Q8N8K9 716 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 PLA2G15Q8NCC3 412 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ATXN2LQ8WWM7 1075 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 EDAQ92838 391 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 LPPQ93052 612 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC7A6OSQ96CW6 309 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ZG16BQ96DA0 208 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 TRIM44Q96DX7 344 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 CLIP3Q96DZ5 547 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 SCLYQ96I15 445 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 CEP89Q96ST8 783 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 NOL10Q9BSC4 688 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 GPR87Q9BY21 358 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 PDGFDQ9GZP0 370 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 OSBPL2Q9H1P3 480 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 PDCL3Q9H2J4 239 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 SLC6A15Q9H2J7 730 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 SLITRK6Q9H5Y7 841 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 DCTPP1Q9H773 170 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 GRPEL1Q9HAV7 217 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 AURKAIP1Q9NWT8 199 aaPredicted RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 NOB1Q9ULX3 412 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 VWA7Q9Y334 891 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 B3GALT1Q9Y5Z6 326 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 MAP2P11137 1827 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 VIRMAQ69YN4 1812 aaKnown RBP2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 CACNA1FO60840 1977 aa2.47□□□□□ -2.01
SNRNP40-207ENST00000491106 ADGRF5Q8IZF2 1346 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CEP152O94986 1710 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 UNC13BO14795 1591 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 A0A087X1B8 175 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 GOLGA6L6A8MZA4 724 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 PPP1R12AO14974 1030 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 PLSCR1O15162 318 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 EPB41L2O43491 1005 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RRP9O43818 475 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 KPNA6O60684 536 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RAMP2O60895 175 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 GLRX3O76003 335 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RECQL4O94761 1208 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 TOX4O94842 621 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 PCDH8O95206 1070 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 HSP90AA1P07900 732 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 HK1P19367 917 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 PTX3P26022 381 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ACRV1P26436 265 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MCM5P33992 734 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 DDIT3P35638 169 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MAN2A2P49641 1150 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MCM2P49736 904 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ANTXR2P58335 489 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SMAD3P84022 425 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RASA3Q14644 834 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RRP1BQ14684 758 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 STILQ15468 1287 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MAN2A1Q16706 1144 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 C2orf27AQ580R0 203 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 BMP2KLQ5H9B9 411 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CRB2Q5IJ48 1285 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CATSPEREQ5SY80 951 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 FKBP15Q5T1M5 1219 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CDCA2Q69YH5 1023 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ZCCHC8Q6NZY4 707 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 Q6ZSN1 163 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 HDGFL2Q7Z4V5 671 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 C11orf74Q86VG3 221 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SKAP1Q86WV1 359 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 NOSTRINQ8IVI9 506 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ELOA2Q8IYF1 753 aaPredicted RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 GPR135Q8IZ08 494 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 CHST14Q8NCH0 376 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SH3TC2Q8TF17 1288 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 SSH1Q8WYL5 1049 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RTF1Q92541 710 aaKnown RBP2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 RABGGTAQ92696 567 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 DLG3Q92796 817 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MKL1Q969V6 931 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MIEF2Q96C03 454 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ARMC5Q96C12 935 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 ZNF503Q96F45 646 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 MAML3Q96JK9 1138 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 HIST1H2AHQ96KK5 128 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 C8orf37Q96NL8 207 aa2.46□□□□□ -2.02
SNRNP40-207ENST00000491106 PPP1R9BQ96SB3 815 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms