RNA–Protein interactions for RNA: ENST00000491104.1

CACNA1C-227, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 5

Gene CACNA1C, Length 669 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-227ENST00000491104 ZNF568Q3ZCX4 644 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 TMEM240Q5SV17 173 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 C9orf50Q5SZB4 431 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 NOTUMQ6P988 496 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 STXBP4Q6ZWJ1 553 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 APBB2Q92870 758 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 KCNN1Q92952 543 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 HAPLN2Q9GZV7 340 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 EXOC7Q9UPT5 735 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 CTNND2Q9UQB3 1225 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 TNFSF13BQ9Y275 285 aa11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 TNRC18O15417 2968 aaPredicted RBP11.8□□□□□ -0.52
CACNA1C-227ENST00000491104 A0A1B0GUA9 196 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 SYCE3A1L190 88 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 TRIM49BA6NDI0 452 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 ENPP3O14638 875 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 N4BP3O15049 544 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 CLIC2O15247 247 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 PIGRP01833 764 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 FGBP02675 491 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 PFKMP08237 780 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 ZSCAN20P17040 1043 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 AXLP30530 894 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 NLRP12P59046 1061 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 DEFB103AP81534 67 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 IKBKEQ14164 716 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 DPCR1Q3MIW9 517 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 SEZ6Q53EL9 994 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 PSRC1Q6PGN9 363 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 TMCO2Q7Z6W1 182 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 CEP120Q8N960 986 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 TRIML1Q8N9V2 468 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 ZSWIM2Q8NEG5 633 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 CBWD1Q9BRT8 395 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 APOL6Q9BWW8 343 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 CDT1Q9H211 546 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 TSPYL2Q9H2G4 693 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 KCTD10Q9H3F6 313 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 SEMA6BQ9H3T3 888 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 PCIF1Q9H4Z3 704 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 PTPRHQ9HD43 1115 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 FAM105AQ9NUU6 356 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 CXXC1Q9P0U4 656 aaPredicted RBP11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 HES2Q9Y543 173 aa11.79□□□□□ -0.52
CACNA1C-227ENST00000491104 TRIP11Q15643 1979 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 TTC3P53804 2025 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 MEIS3P2A8K0S8 358 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 PPP1R3GB7ZBB8 358 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 TGFB1I1O43294 461 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 TOM1L1O75674 476 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ACTN1P12814 892 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ATF7P17544 494 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 PROZP22891 400 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ADSSP30520 456 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 STX17P56962 302 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 OSTNP61366 133 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 WDR5P61964 334 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 NCBP1Q09161 790 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 KNOP1Q1ED39 458 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ZSCAN23Q3MJ62 389 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ZBTB41Q5SVQ8 909 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 SLC27A1Q6PCB7 646 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 MPZL3Q6UWV2 235 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ZPBP2Q6X784 338 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 C11orf57Q6ZUT1 292 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 THNSL1Q8IYQ7 743 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 GUF1Q8N442 669 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 RNF169Q8NCN4 708 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 SMG8Q8ND04 991 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 NOC3LQ8WTT2 800 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 LPPQ93052 612 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 SAAL1Q96ER3 474 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 GDF15Q99988 308 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ADPGKQ9BRR6 497 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 TCHPQ9BT92 498 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 FTHL17Q9BXU8 183 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 UBE2OQ9C0C9 1292 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 GBP3Q9H0R5 595 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 GZF1Q9H116 711 aaPredicted RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 NXF3Q9H4D5 531 aaKnown RBP11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 TMEM206Q9H813 350 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 CHST12Q9NRB3 414 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 RGS18Q9NS28 235 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 IPPQ9Y573 584 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 ANK1P16157 1881 aa11.78□□□□□ -0.52
CACNA1C-227ENST00000491104 CITO14578 2027 aa11.77□□□□□ -0.52
CACNA1C-227ENST00000491104 RALGAPA2Q2PPJ7 1873 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 GBF1Q92538 1859 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 ABHD14A-ACY1A0A1B0GW23 586 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 GOLGA8IPA6NC78 632 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 GOLGA8JA6NMD2 632 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 C9IYK1 514 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 UPP2O95045 317 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 SCP2P22307 547 aa11.77□□□□□ -0.53
CACNA1C-227ENST00000491104 ABCD1P33897 745 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms