RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 STK25O00506 426 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 CFHP08603 1231 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 PSMA5P28066 241 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 LAMTOR4Q0VGL1 99 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 SKAP1Q86WV1 359 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 COLGALT2Q8IYK4 626 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 RNF168Q8IYW5 571 aaPredicted RBP23.07■■□□□ 1.28
CLIP2-208ENST00000491075 TCP11Q8WWU5 503 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 TMEM143Q96AN5 459 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 VAV3Q9UKW4 847 aa23.07■■□□□ 1.28
CLIP2-208ENST00000491075 KRBA1A5PL33 1030 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 SLC37A4O43826 429 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 ERLIN2O94905 339 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 DEXIO95424 95 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 EFEMP2O95967 443 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 P4HBP07237 508 aaKnown RBP23.06■■□□□ 1.28
CLIP2-208ENST00000491075 SRFP11831 508 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 ITGA4P13612 1032 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 OR1G1P47890 313 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 PCBP1Q15365 356 aaKnown RBP eCLIP23.06■■□□□ 1.28
CLIP2-208ENST00000491075 KRT25Q7Z3Z0 450 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 SMG8Q8ND04 991 aaKnown RBP23.06■■□□□ 1.28
CLIP2-208ENST00000491075 HDAC7Q8WUI4 952 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 RSAD2Q8WXG1 361 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 SMG7Q92540 1137 aaKnown RBP23.06■■□□□ 1.28
CLIP2-208ENST00000491075 FAM20AQ96MK3 541 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 RXFP1Q9HBX9 757 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 IPPQ9Y573 584 aa23.06■■□□□ 1.28
CLIP2-208ENST00000491075 ASAP2O43150 1006 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 PAPLNO95428 1278 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 C1RP00736 705 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 DSG1Q02413 1049 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 DSC1Q08554 894 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 NPY5RQ15761 445 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 INF2Q27J81 1249 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 KIAA0319Q5VV43 1072 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 TAS1R1Q7RTX1 841 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 SLC44A3Q8N4M1 653 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 ZNF579Q8NAF0 562 aaKnown RBP23.05■■□□□ 1.28
CLIP2-208ENST00000491075 RNF149Q8NC42 400 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 CCDC51Q96ER9 411 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 MYADMQ96S97 322 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 SLKQ9H2G2 1235 aaPredicted RBP23.05■■□□□ 1.28
CLIP2-208ENST00000491075 PLEKHA4Q9H4M7 779 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 KCNMB3Q9NPA1 279 aa23.05■■□□□ 1.28
CLIP2-208ENST00000491075 FANCMQ8IYD8 2048 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 ARL5CA6NH57 179 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 CPLX1O14810 134 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 NR1I2O75469 434 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 RFPL2O75678 378 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 LMNAP02545 664 aaKnown RBP23.04■■□□□ 1.28
CLIP2-208ENST00000491075 AXLP30530 894 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 MLH1P40692 756 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 EMC2Q15006 297 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 NOTUMQ6P988 496 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 CENPQQ7L2Z9 268 aaPredicted RBP23.04■■□□□ 1.28
CLIP2-208ENST00000491075 FERMT3Q86UX7 667 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 C4orf19Q8IY42 314 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 TBC1D17Q9HA65 648 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 WRAP73Q9P2S5 460 aaPredicted RBP23.04■■□□□ 1.28
CLIP2-208ENST00000491075 CA14Q9ULX7 337 aa23.04■■□□□ 1.28
CLIP2-208ENST00000491075 GCFC2P16383 781 aaKnown RBP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 YWHABP31946 246 aaKnown RBP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 OTUD6AQ7L8S5 288 aa23.03■■□□□ 1.28
CLIP2-208ENST00000491075 KCNG4Q8TDN1 519 aa23.03■■□□□ 1.28
CLIP2-208ENST00000491075 ZNF707Q96C28 371 aaPredicted RBP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 GAD1Q99259 594 aa23.03■■□□□ 1.28
CLIP2-208ENST00000491075 LXNQ9BS40 222 aa23.03■■□□□ 1.28
CLIP2-208ENST00000491075 PIDD1Q9HB75 910 aa23.03■■□□□ 1.28
CLIP2-208ENST00000491075 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 BMP2KQ9NSY1 1161 aaPredicted RBP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 ZDHHC7Q9NXF8 308 aa23.03■■□□□ 1.28
CLIP2-208ENST00000491075 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 EP300Q09472 2414 aaPredicted RBP23.03■■□□□ 1.28
CLIP2-208ENST00000491075 TSPAN1O60635 241 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 SCNN1GP51170 649 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 NCBP1Q09161 790 aaKnown RBP23.02■■□□□ 1.28
CLIP2-208ENST00000491075 PPP4R3AQ6IN85 833 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 PHLDB3Q6NSJ2 640 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 GPR65Q8IYL9 337 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 HACE1Q8IYU2 909 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 COLEC11Q9BWP8 271 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 EIF2AQ9BY44 585 aaKnown RBP23.02■■□□□ 1.28
CLIP2-208ENST00000491075 CHST7Q9NS84 486 aa23.02■■□□□ 1.28
CLIP2-208ENST00000491075 TBX3O15119 743 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 MYBP10242 640 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 CREMQ03060 361 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 TOB2Q14106 344 aaPredicted RBP23.01■■□□□ 1.27
CLIP2-208ENST00000491075 MXD4Q14582 209 aaPredicted RBP23.01■■□□□ 1.27
CLIP2-208ENST00000491075 EPHA7Q15375 998 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 ZC3H14Q6PJT7 736 aaKnown RBP23.01■■□□□ 1.27
CLIP2-208ENST00000491075 CPLX2Q6PUV4 134 aaKnown RBP23.01■■□□□ 1.27
CLIP2-208ENST00000491075 NEK8Q86SG6 692 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 GPR152Q8TDT2 470 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 ZFP42Q96MM3 310 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 MTRQ99707 1265 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 NT5C3AQ9H0P0 336 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 CSRNP2Q9H175 543 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 ARHGEF3Q9NR81 526 aa23.01■■□□□ 1.27
CLIP2-208ENST00000491075 GIT1Q9Y2X7 761 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms