RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 PLA2G4FQ68DD2 849 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 DNAJC24Q6P3W2 148 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 PAXIP1Q6ZW49 1069 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 IRF2BP1Q8IU81 584 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF564Q8TBZ8 553 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SMARCAD1Q9H4L7 1026 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SPC25Q9HBM1 224 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 NKIRAS1Q9NYS0 192 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 HESX1Q9UBX0 185 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 BCORQ6W2J9 1755 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 C10orf71Q711Q0 1435 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 TLR3O15455 904 aaKnown RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 RNF8O76064 485 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 PLEKP08567 350 aaPredicted RBP7.89□□□□□ -1.15
NPHP3-208ENST00000490993 CNGA1P29973 690 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 CHRNA3P32297 505 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 ADCY8P40145 1251 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 RARRES1P49788 294 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 VSNL1P62760 191 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SNAPC2Q13487 334 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 TERF2Q15554 542 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 SLC35G1Q2M3R5 365 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 COG1Q8WTW3 980 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 NAGPAQ9UK23 515 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 STRIP2Q9ULQ0 834 aa7.89□□□□□ -1.15
NPHP3-208ENST00000490993 NAV1Q8NEY1 1877 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NDUFAB1O14561 156 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 SLC7A5Q01650 507 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 MYO1EQ12965 1108 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 DHX34Q14147 1143 aaKnown RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 IER5Q5VY09 327 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 TMEM35BQ8NCS4 154 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 SLC35G2Q8TBE7 412 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CNKSR2Q8WXI2 1034 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NUP85Q9BW27 656 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ZMYND15Q9H091 742 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 KCTD10Q9H3F6 313 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 SAMD15Q9P1V8 674 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 FAN1Q9Y2M0 1017 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 BAZ2AQ9UIF9 1905 aaKnown RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CES2O00748 559 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 RGS16O15492 202 aaPredicted RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 LYPLA2O95372 231 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 FECHP22830 423 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CDC42EP1Q00587 391 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 TAP1Q03518 808 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CCNI2Q6ZMN8 369 aaPredicted RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ERO1BQ86YB8 467 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 P3H4Q92791 437 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 AP1M1Q9BXS5 423 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ADAM22Q9P0K1 906 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 BAZ2BQ9UIF8 2168 aaKnown RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 MYH2Q9UKX2 1941 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 MYH14Q7Z406 1995 aaKnown RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 PTPRAP18433 802 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 KLRC1P26715 233 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 MARK3P27448 753 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ARHGAP25P42331 645 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NAMPTP43490 491 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CASP4P49662 377 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF667Q5HYK9 610 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NAA35Q5VZE5 725 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CCDC121Q6ZUS5 278 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 SLC9A9Q8IVB4 645 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 CCDC89Q8N998 374 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NLRP7Q8WX94 980 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 SLC35C1Q96A29 364 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 TAF1DQ9H5J8 278 aaPredicted RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NFU1Q9UMS0 254 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 GINS2Q9Y248 185 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 SMIM23A6NLE4 172 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 HMGB1P1B2RPK0 211 aaPredicted RBP7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NPTX2P47972 431 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ECM1Q16610 540 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 ZSCAN26Q16670 478 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 DUOXA2Q1HG44 320 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 C2orf69Q8N8R5 385 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NLRP4Q96MN2 994 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 NCAPGQ9BPX3 1015 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 AP5M1Q9H0R1 490 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 PLEKHA4Q9H4M7 779 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 WNK3Q9BYP7 1800 aa7.88□□□□□ -1.15
NPHP3-208ENST00000490993 A0A087X0T9 212 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF185O15231 689 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 STK10O94804 968 aaKnown RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 FAM228BP0C875 321 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 TGFB3P10600 412 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ZNF568Q3ZCX4 644 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 ADAT2Q7Z6V5 191 aaKnown RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 KSR1Q8IVT5 923 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 MAP7D3Q8IWC1 876 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 RBM41Q96IZ5 413 aaKnown RBP7.87□□□□□ -1.15
NPHP3-208ENST00000490993 FMO2Q99518 471 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 LACRTQ9GZZ8 138 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 EPC1Q9H2F5 836 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 NFASCO94856 1347 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 CXCL11O14625 94 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 MAGEB2O15479 319 aa7.87□□□□□ -1.15
NPHP3-208ENST00000490993 CYP26A1O43174 497 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms