RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 DNAJC25Q9H1X3 360 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 FZD8Q9H461 694 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 CHST12Q9NRB3 414 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 ANKFY1Q9P2R3 1169 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 RWDD2AQ9UIY3 292 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 TBX21Q9UL17 535 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 PIN4Q9Y237 131 aaKnown RBP11.99□□□□□ -0.49
VARS2-210ENST00000490699 NR2E3Q9Y5X4 410 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 ADGRA3Q8IWK6 1321 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 CNTNAP2Q9UHC6 1331 aa11.99□□□□□ -0.49
VARS2-210ENST00000490699 KIAA0355O15063 1070 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 CETN3O15182 167 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 TOM1L1O75674 476 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 LDHAP00338 332 aaKnown RBP11.98□□□□□ -0.49
VARS2-210ENST00000490699 TIMP1P01033 207 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 TPM2P07951 284 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 PFKMP08237 780 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 IQCF3P0C7M6 154 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 SKIP12755 728 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 ZNF165P49910 485 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 CASP5P51878 434 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 MGAT3Q09327 533 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 EDRF1Q3B7T1 1238 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 FBXO47Q5MNV8 452 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 TWF2Q6IBS0 349 aaKnown RBP11.98□□□□□ -0.49
VARS2-210ENST00000490699 USP37Q86T82 979 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 RPUSD2Q8IZ73 545 aaKnown RBP11.98□□□□□ -0.49
VARS2-210ENST00000490699 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
VARS2-210ENST00000490699 WNT8BQ93098 351 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 CTAGE1Q96RT6 745 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 FIZ1Q96SL8 496 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 BPIFA3Q9BQP9 254 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 IFIH1Q9BYX4 1025 aaKnown RBP11.98□□□□□ -0.49
VARS2-210ENST00000490699 KIAA1586Q9HCI6 787 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 AGPAT5Q9NUQ2 364 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 MAGEC2Q9UBF1 373 aaPredicted RBP11.98□□□□□ -0.49
VARS2-210ENST00000490699 ST3GAL5Q9UNP4 418 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 FRMD4BQ9Y2L6 1034 aa11.98□□□□□ -0.49
VARS2-210ENST00000490699 TANC1Q9C0D5 1861 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 SIP14410 1827 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 PPP1R3GB7ZBB8 358 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 TSPAN1O60635 241 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 PIGRP01833 764 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 ACTN1P12814 892 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 GARTP22102 1010 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 CYP2C18P33260 490 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 RAB27AP51159 221 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 CCL23P55773 120 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 FKBP3Q00688 224 aaKnown RBP11.97□□□□□ -0.49
VARS2-210ENST00000490699 MYL5Q02045 173 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 MYBPC2Q14324 1141 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 LPIN1Q14693 890 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 NOLC1Q14978 699 aaKnown RBP eCLIP11.97□□□□□ -0.49
VARS2-210ENST00000490699 SLC27A1Q6PCB7 646 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 FOXR2Q6PJQ5 311 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 MPZL3Q6UWV2 235 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 CSGALNACT2Q8N6G5 542 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 MSTO1Q9BUK6 570 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 TARS2Q9BW92 718 aaKnown RBP11.97□□□□□ -0.49
VARS2-210ENST00000490699 STRA6Q9BX79 667 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 TNFSF13BQ9Y275 285 aa11.97□□□□□ -0.49
VARS2-210ENST00000490699 NOC2LQ9Y3T9 749 aaKnown RBP11.97□□□□□ -0.49
VARS2-210ENST00000490699 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 EXOC3O60645 756 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 EFCAB14O75071 495 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 CSDE1O75534 798 aaKnown RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 GNA14O95837 355 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 NR3C1P04150 777 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 MCF2P10911 925 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 EPB41P11171 864 aaKnown RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 HARSP12081 509 aaKnown RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 ARF4P18085 180 aaPredicted RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 BMP6P22004 513 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 NR2F2P24468 414 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 CD52P31358 61 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 CYP2J2P51589 502 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 YARSP54577 528 aaKnown RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 STX17P56962 302 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 PPIGQ13427 754 aaKnown RBP eCLIP11.96□□□□□ -0.498e-8■■□□□ 12.7
VARS2-210ENST00000490699 CENPPQ6IPU0 288 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 MFSD5Q6N075 450 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 FAM228AQ86W67 206 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 GLIS3Q8NEA6 775 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 FAM200AQ8TCP9 573 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 TMEM40Q8WWA1 233 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 ACO2Q99798 780 aaKnown RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 CCDC94Q9BW85 323 aaPredicted RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 FGFBP2Q9BYJ0 223 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 MINDY3Q9H8M7 445 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 CDHR5Q9HBB8 845 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 AGPAT3Q9NRZ7 376 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 C1orf112Q9NSG2 853 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 AGO2Q9UKV8 859 aaKnown RBP11.96□□□□□ -0.49
VARS2-210ENST00000490699 PADI3Q9ULW8 664 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 TRAF3IP3Q9Y228 551 aa11.96□□□□□ -0.49
VARS2-210ENST00000490699 B4GALT5O43286 388 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 KRT13P13646 458 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 FGFR4P22455 802 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 FPGSQ05932 587 aa11.95□□□□□ -0.5
VARS2-210ENST00000490699 SPAG1Q07617 926 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms