RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 FBXL6Q8N531 539 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 SNX21Q969T3 373 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 TMEM143Q96AN5 459 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 DYDC2Q96IM9 177 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 EIF2AK1Q9BQI3 630 aaKnown RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 TRIM6Q9C030 488 aaPredicted RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 TTC12Q9H892 705 aaPredicted RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 MRPL17Q9NRX2 175 aaKnown RBP11.51□□□□□ -0.57
TTC28-207ENST00000490475 FAN1Q9Y2M0 1017 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 ARID2Q68CP9 1835 aa11.51□□□□□ -0.57
TTC28-207ENST00000490475 SPDYE4A6NLX3 237 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 NT5C1B-RDH14C9J2C7 533 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 H3BQV1 296 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 INPPL1O15357 1258 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 SLITRK3O94933 977 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 MCM7P33993 719 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 TOB1P50616 345 aaPredicted RBP11.5□□□□□ -0.57
TTC28-207ENST00000490475 PTPN5P54829 565 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 PTENP60484 403 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 NBR1Q14596 966 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 KIAA1841Q6NSI8 718 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 AGMOQ6ZNB7 445 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 CABP7Q86V35 215 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 GPR65Q8IYL9 337 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 LPPQ93052 612 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 ACSF2Q96CM8 615 aaPredicted RBP11.5□□□□□ -0.57
TTC28-207ENST00000490475 FBXL18Q96ME1 805 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 HSD17B14Q9BPX1 270 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 GBP3Q9H0R5 595 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 TMEM60Q9H2L4 133 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 SFXN1Q9H9B4 322 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 RGL1Q9NZL6 768 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 SORCS3Q9UPU3 1222 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
TTC28-207ENST00000490475 MYO10Q9HD67 2058 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 INO80B-WBP1J3KQ70 363 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 URODP06132 367 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 ADH1AP07327 375 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 MUTP22033 750 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 HOXA11P31270 313 aaPredicted RBP11.49□□□□□ -0.57
TTC28-207ENST00000490475 TXKP42681 527 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 SLC11A1P49279 550 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 RBM10P98175 930 aaKnown RBP11.49□□□□□ -0.57
TTC28-207ENST00000490475 NHLH1Q02575 133 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 CYP4A11Q02928 519 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 CREMQ03060 361 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 CTTNQ14247 550 aaKnown RBP11.49□□□□□ -0.57
TTC28-207ENST00000490475 C15orf39Q6ZRI6 1047 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 ZDHHC14Q8IZN3 488 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 TDRD5Q8NAT2 981 aaKnown RBP11.49□□□□□ -0.57
TTC28-207ENST00000490475 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 ERMNQ8TAM6 284 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 PRIMPOLQ96LW4 560 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 MTMR9Q96QG7 549 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 CSRNP2Q9H175 543 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 TUFT1Q9NNX1 390 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 WRAP73Q9P2S5 460 aaPredicted RBP11.49□□□□□ -0.57
TTC28-207ENST00000490475 DBR1Q9UK59 544 aaKnown RBP11.49□□□□□ -0.57
TTC28-207ENST00000490475 STK24Q9Y6E0 443 aa11.49□□□□□ -0.57
TTC28-207ENST00000490475 TDRD15B5MCY1 1934 aaKnown RBP11.48□□□□□ -0.57
TTC28-207ENST00000490475 SOD2P04179 222 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 KLRC2P26717 231 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 RARRES1P49788 294 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 PTPN14Q15678 1187 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 TTC38Q5R3I4 469 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 OTOP3Q7RTS5 596 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 ZBTB8OSQ8IWT0 167 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 HDAC7Q8WUI4 952 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 INTS4Q96HW7 963 aaKnown RBP11.48□□□□□ -0.57
TTC28-207ENST00000490475 NACC1Q96RE7 527 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 COLEC11Q9BWP8 271 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 RHOBTB2Q9BYZ6 727 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 C2orf40Q9H1Z8 148 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 POMKQ9H5K3 350 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.48□□□□□ -0.57
TTC28-207ENST00000490475 DNAJB4Q9UDY4 337 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 IPPQ9Y573 584 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 PCDHB6Q9Y5E3 794 aa11.48□□□□□ -0.57
TTC28-207ENST00000490475 CACNA1HO95180 2353 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 NRP1O14786 923 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 TSPAN1O60635 241 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 SYT1P21579 422 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 ARL2P36404 184 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 LONRF3Q496Y0 759 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 UBXN11Q5T124 520 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 RARS2Q5T160 578 aaKnown RBP11.47□□□□□ -0.57
TTC28-207ENST00000490475 HAUS3Q68CZ6 603 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 SLC27A1Q6PCB7 646 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 CCDC149Q6ZUS6 474 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 APBB1IPQ7Z5R6 666 aaPredicted RBP11.47□□□□□ -0.57
TTC28-207ENST00000490475 ZNF280BQ86YH2 543 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 HSCBQ8IWL3 235 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
TTC28-207ENST00000490475 SPRYD3Q8NCJ5 442 aa11.47□□□□□ -0.57
TTC28-207ENST00000490475 CMASQ8NFW8 434 aaPredicted RBP11.47□□□□□ -0.57
TTC28-207ENST00000490475 SLC22A17Q8WUG5 538 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms