RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 FAM83BQ5T0W9 1011 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 SLC10A4Q96EP9 437 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 BTBD6Q96KE9 485 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 APOL6Q9BWW8 343 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 STK33Q9BYT3 514 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ROPN1BQ9BZX4 212 aaPredicted RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ROPN1Q9HAT0 212 aaPredicted RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 ZNF302Q9NR11 478 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 SLC9A2Q9UBY0 812 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 VPS9D1Q9Y2B5 631 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 RALAP11233 206 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 COASYQ13057 564 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 GPD1LQ8N335 351 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 SYN2Q92777 582 aaPredicted RBP9.38□□□□□ -0.91
LSAMP-205ENST00000490035 COA7Q96BR5 231 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 CNPY3Q9BT09 278 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 LY9Q9HBG7 655 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 BCORL1Q5H9F3 1711 aa9.38□□□□□ -0.91
LSAMP-205ENST00000490035 CDH16O75309 829 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 NLRP11P59045 1033 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 SPICE1Q8N0Z3 855 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 KATNAL1Q9BW62 490 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 A0A1W2PQJ5 194 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 RPS6KA4O75676 772 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 HSPA1AP0DMV8 641 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 HSPA1BP0DMV9 641 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 PRKG1Q13976 671 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 LRRC41Q15345 812 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 C1orf146Q5VVC0 180 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ZC3H18Q86VM9 953 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 USP13Q92995 863 aaPredicted RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 MED15Q96RN5 788 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 NDEL1Q9GZM8 345 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 HAUS5O94927 633 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ANP32DO95626 131 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 MUTP22033 750 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 CCDC137Q6PK04 289 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 NARFQ9UHQ1 456 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 KDM6BO15054 1643 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 APOL1O14791 398 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 RWDD4Q6NW29 188 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 C16orf87Q6PH81 154 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 GDAP1Q8TB36 358 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 MORC2Q9Y6X9 1032 aaPredicted RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 PSMA3P25788 255 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 NEK2P51955 445 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 NUDCD3Q8IVD9 361 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 UHMK1Q8TAS1 419 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 RBM46Q8TBY0 533 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 COPG1Q9Y678 874 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 METP08581 1390 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ITIH2P19823 946 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ARFIP2P53365 341 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 AP1B1Q10567 949 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 FAM9CQ8IZT9 166 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 PCYOX1LQ8NBM8 494 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 CALML6Q8TD86 181 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 RMDN1Q96DB5 314 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 PLA2G12BQ9BX93 195 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ZBTB1Q9Y2K1 713 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ASB14A6NK59 587 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 KCNQ3O43525 872 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 PRCPP42785 496 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 DYNLL1P63167 89 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 TSTA3Q13630 321 aaPredicted RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 AGBL2Q5U5Z8 902 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 TTC19Q6DKK2 380 aaPredicted RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 COG1Q8WTW3 980 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 TTC17Q96AE7 1141 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 TGS1Q96RS0 853 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ELAC2Q9BQ52 826 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 PLEKHA4Q9H4M7 779 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ASAP1Q9ULH1 1129 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 CLTCQ00610 1675 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 IL18RAPO95256 599 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 EYA4O95677 639 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ACADSBP45954 432 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 WASHC5Q12768 1159 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 EIF2B5Q13144 721 aaKnown RBP9.37□□□□□ -0.91
LSAMP-205ENST00000490035 MTA1Q13330 715 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 UNC5CLQ8IV45 518 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 ABCF3Q9NUQ8 709 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 MRFAP1Q9Y605 127 aa9.37□□□□□ -0.91
LSAMP-205ENST00000490035 KDM1AO60341 852 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 TRPA1O75762 1119 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 KLHL2O95198 593 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 MCAMP43121 646 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 CC2D1AQ6P1N0 951 aaPredicted RBP9.36□□□□□ -0.91
LSAMP-205ENST00000490035 DCLK2Q8N568 766 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 APBB2Q92870 758 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 MOV10L1Q9BXT6 1211 aaKnown RBP9.36□□□□□ -0.91
LSAMP-205ENST00000490035 C17orf75Q9HAS0 396 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 USP17L10C9JJH3 530 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 BCAR1P56945 870 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 PRAMEP78395 509 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 CCDC15Q0P6D6 951 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 EDRF1Q3B7T1 1238 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 FBXO38Q6PIJ6 1188 aa9.36□□□□□ -0.91
LSAMP-205ENST00000490035 SAMD3Q8N6K7 520 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms