RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 NEMP1O14524 444 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 DNAJC6O75061 913 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 FAM20BO75063 409 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 TMEM127O75204 238 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 GYPEP15421 78 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 PTGS2P35354 604 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 DUSP2Q05923 314 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 Q6ZPA2 131 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 DDX46Q7L014 1031 aaKnown RBP5.44□□□□□ -1.54
HMGN1-218ENST00000490032 MRGPREQ86SM8 312 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 FAM83AQ86UY5 434 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 GLB1L3Q8NCI6 653 aaPredicted RBP5.44□□□□□ -1.54
HMGN1-218ENST00000490032 SLC25A43Q8WUT9 341 aaPredicted RBP5.44□□□□□ -1.54
HMGN1-218ENST00000490032 LENG9Q96B70 501 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 TTC1Q99614 292 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 PRRX2Q99811 253 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 CPPED1Q9BRF8 314 aaPredicted RBP5.44□□□□□ -1.54
HMGN1-218ENST00000490032 CPEB1Q9BZB8 566 aaKnown RBP5.44□□□□□ -1.54
HMGN1-218ENST00000490032 IKZF4Q9H2S9 585 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 KCTD10Q9H3F6 313 aa5.44□□□□□ -1.54
HMGN1-218ENST00000490032 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.44□□□□□ -1.54
HMGN1-218ENST00000490032 TRIM24O15164 1050 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 ULK1O75385 1050 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 KRT4P19013 534 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 HK1P19367 917 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 NR4A1P22736 598 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 ID4P47928 161 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 SESN3P58005 492 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 VPS72Q15906 364 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 FSCN1Q16658 493 aaKnown RBP5.43□□□□□ -1.54
HMGN1-218ENST00000490032 CT83Q5H943 113 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 CRB2Q5IJ48 1285 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 PCSK4Q6UW60 755 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 GPRIN1Q7Z2K8 1008 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 ZNF276Q8N554 614 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 LILRA3Q8N6C8 439 aaPredicted RBP5.43□□□□□ -1.54
HMGN1-218ENST00000490032 CLRN3Q8NCR9 226 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 SNX33Q8WV41 574 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 HAS1Q92839 578 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 CEP89Q96ST8 783 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 NRDE2Q9H7Z3 1164 aa5.43□□□□□ -1.54
HMGN1-218ENST00000490032 TOPORSQ9NS56 1045 aaPredicted RBP5.43□□□□□ -1.54
HMGN1-218ENST00000490032 APOBEC2Q9Y235 224 aaKnown RBP5.43□□□□□ -1.54
HMGN1-218ENST00000490032 LPLP06858 475 aa5.42□□□□□ -1.54
HMGN1-218ENST00000490032 HSD3B2P26439 372 aa5.42□□□□□ -1.54
HMGN1-218ENST00000490032 LGALS4P56470 323 aa5.42□□□□□ -1.54
HMGN1-218ENST00000490032 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
HMGN1-218ENST00000490032 ACAP3Q96P50 834 aa5.42□□□□□ -1.54
HMGN1-218ENST00000490032 FZD1Q9UP38 647 aa5.42□□□□□ -1.54
HMGN1-218ENST00000490032 A0A087X1B8 175 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 RPS6KA4O75676 772 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 CTSSP25774 331 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 UGT8Q16880 541 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 IQSEC1Q6DN90 963 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 GIMAP6Q6P9H5 292 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 ABHD15Q6UXT9 468 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 STRA8Q7Z7C7 330 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 MRGPRGQ86SM5 289 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 EAF2Q96CJ1 260 aaPredicted RBP5.41□□□□□ -1.54
HMGN1-218ENST00000490032 NDC1Q9BTX1 674 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 EPC1Q9H2F5 836 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 CAAP1Q9H8G2 361 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 SORCS3Q9UPU3 1222 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 CLCA2Q9UQC9 943 aa5.41□□□□□ -1.54
HMGN1-218ENST00000490032 PRAMEF4O60810 478 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 PPFIA4O75335 1185 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 RECQL4O94761 1208 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 GASTP01350 101 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 ITGB1P05556 798 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 ENPP1P22413 925 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 ZFP36P26651 326 aaKnown RBP5.4□□□□□ -1.54
HMGN1-218ENST00000490032 SOX5P35711 763 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 APBA1Q02410 837 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 STRN3Q13033 797 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 DRICH1Q6PGQ1 229 aaPredicted RBP5.4□□□□□ -1.54
HMGN1-218ENST00000490032 HDGFL2Q7Z4V5 671 aaPredicted RBP5.4□□□□□ -1.54
HMGN1-218ENST00000490032 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
HMGN1-218ENST00000490032 AFAP1L2Q8N4X5 818 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 RAX2Q96IS3 184 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 KCNH6Q9H252 994 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 USP35Q9P2H5 1018 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 TMA7Q9Y2S6 64 aaKnown RBP5.4□□□□□ -1.54
HMGN1-218ENST00000490032 HS3ST4Q9Y661 456 aa5.4□□□□□ -1.54
HMGN1-218ENST00000490032 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 FOXN1O15353 648 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 BRINP1O60477 761 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 ITGA10O75578 1167 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 HSP90B1P14625 803 aaKnown RBP5.39□□□□□ -1.55
HMGN1-218ENST00000490032 MASP1P48740 699 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 INHBEP58166 350 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 CSRP2Q16527 193 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.39□□□□□ -1.55
HMGN1-218ENST00000490032 SDE2Q6IQ49 451 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 LRRC55Q6ZSA7 311 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 XYLT1Q86Y38 959 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 SYNE4Q8N205 404 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 UBR7Q8N806 425 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 CPT1CQ8TCG5 803 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 ORAI2Q96SN7 254 aa5.39□□□□□ -1.55
HMGN1-218ENST00000490032 CDC5LQ99459 802 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms