RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 RBL2Q08999 1139 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 RNF220Q5VTB9 566 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 ZNF467Q7Z7K2 595 aaPredicted RBP10.6□□□□□ -0.71
NOD1-208ENST00000489614 TMEM110Q86TL2 294 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 CCDC63Q8NA47 563 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 ZIM3Q96PE6 472 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 PNMA3Q9UL41 463 aa10.6□□□□□ -0.71
NOD1-208ENST00000489614 POTEB3A0JP26 581 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 IPO5O00410 1097 aaKnown RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 CCNE2O96020 404 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 EIF4BP23588 611 aaKnown RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 UBXN2AP68543 259 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 CDKAL1Q5VV42 579 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 POTEBQ6S5H4 581 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 SDCCAG8Q86SQ7 713 aaPredicted RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 PPFIBP1Q86W92 1011 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ENOX1Q8TC92 643 aaKnown RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 HOMER2Q9NSB8 354 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 DMGDHQ9UI17 866 aaKnown RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 ANK1P16157 1881 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 A6NNZ2 444 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ATP1A1P05023 1023 aaKnown RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 CYP11B2P19099 503 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 MCCD1P59942 119 aaPredicted RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 PSMC6P62333 389 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 SETDB1Q15047 1291 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 TUBB8Q3ZCM7 444 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 KRT79Q5XKE5 535 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 HAUS3Q68CZ6 603 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 MAMDC4Q6UXC1 1216 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 UNC13DQ70J99 1090 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 HOOK3Q86VS8 718 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ADSSL1Q8N142 457 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 KIAA0895Q8NCT3 520 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 USP6NLQ92738 828 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 CALML4Q96GE6 196 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 SEC16BQ96JE7 1060 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ZNF577Q9BSK1 485 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 TBC1D22BQ9NU19 505 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 IGSF9BQ9UPX0 1349 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 CCL15-CCL14A0A0B4J2E2 113 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 TEX33O43247 280 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 EIF2AK2P19525 551 aaKnown RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 AMPD2Q01433 879 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 SP2Q02086 613 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 CNTN2Q02246 1040 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 MTMR1Q13613 665 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 CCL15Q16663 113 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ANKRD20A2Q5SQ80 823 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ANKRD20A1Q5TYW2 823 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ANKRD20A3Q5VUR7 823 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 EPM2AIP1Q7L775 607 aaPredicted RBP10.59□□□□□ -0.71
NOD1-208ENST00000489614 LONP2Q86WA8 852 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 ERICH1Q86X53 443 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 CACNA2D3Q8IZS8 1091 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 FIZ1Q96SL8 496 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 STRA6Q9BX79 667 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 TEKT3Q9BXF9 490 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 BLZF1Q9H2G9 400 aa10.59□□□□□ -0.71
NOD1-208ENST00000489614 IGF2BP3O00425 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
NOD1-208ENST00000489614 EYA4O95677 639 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 TMOD1P28289 359 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 AFMP43652 599 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 ZNF131P52739 623 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 TTLL12Q14166 644 aaPredicted RBP10.58□□□□□ -0.72
NOD1-208ENST00000489614 GRB14Q14449 540 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 FAM133BQ5BKY9 247 aaKnown RBP10.58□□□□□ -0.72
NOD1-208ENST00000489614 ZNF746Q6NUN9 644 aaPredicted RBP10.58□□□□□ -0.72
NOD1-208ENST00000489614 TMEM174Q8WUU8 243 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 PAGR1Q9BTK6 254 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 PORCNQ9H237 461 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 WDR35Q9P2L0 1181 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 DBR1Q9UK59 544 aaKnown RBP10.58□□□□□ -0.72
NOD1-208ENST00000489614 SAR1BQ9Y6B6 198 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 CYP2C8P10632 490 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 PCK1P35558 622 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 TM4SF4P48230 202 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 ARHGEF16Q5VV41 709 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 C1orf186Q6ZWK4 172 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 CCDC170Q8IYT3 715 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 AENQ8WTP8 325 aaKnown RBP10.58□□□□□ -0.72
NOD1-208ENST00000489614 SYT15Q9BQS2 421 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 NFE2L3Q9Y4A8 694 aa10.58□□□□□ -0.72
NOD1-208ENST00000489614 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 GMNCA6NCL1 334 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 E9PMD0 336 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 FAM110CQ1W6H9 321 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 CCDC62Q6P9F0 684 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 POTEGQ6S5H5 508 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 CPLX4Q7Z7G2 160 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 MAIP1Q8WWC4 291 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.57□□□□□ -0.72
NOD1-208ENST00000489614 PDLIM7Q9NR12 457 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 RMND1Q9NWS8 449 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 STK38LQ9Y2H1 464 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 TELO2Q9Y4R8 837 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 SYNGAP1Q96PV0 1343 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 A8MUI8 341 aa10.57□□□□□ -0.72
NOD1-208ENST00000489614 PDE2AO00408 941 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms