RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 MEIS3P2A8K0S8 358 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 SLC16A4O15374 487 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 FAM13AO94988 1023 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 NPTXRO95502 500 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 SCP2P22307 547 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 STAT6P42226 847 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 ME1P48163 572 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 ZNF558Q96NG5 402 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 MRPL4Q9BYD3 311 aaKnown RBP19.09■□□□□ 0.65
MDC1-206ENST00000489540 PANK2Q9BZ23 570 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 PDZD7Q9H5P4 517 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 PARVGQ9HBI0 331 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 INPP5FQ9Y2H2 1132 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 GIT1Q9Y2X7 761 aa19.09■□□□□ 0.65
MDC1-206ENST00000489540 TTLL13PA6NNM8 815 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 GRM6O15303 877 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 ITGB1P05556 798 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 ALDH7A1P49419 539 aaKnown RBP19.08■□□□□ 0.65
MDC1-206ENST00000489540 ZNF131P52739 623 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 KRT85P78386 507 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.65
MDC1-206ENST00000489540 UBE3AQ05086 875 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 RNASELQ05823 741 aaKnown RBP19.08■□□□□ 0.65
MDC1-206ENST00000489540 AXDND1Q5T1B0 1012 aaPredicted RBP19.08■□□□□ 0.65
MDC1-206ENST00000489540 NT5DC1Q5TFE4 455 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 ATF7IP2Q5U623 682 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 KCNT2Q6UVM3 1135 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 CDR2LQ86X02 465 aaPredicted RBP19.08■□□□□ 0.65
MDC1-206ENST00000489540 THNSL1Q8IYQ7 743 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 MYCT1Q8N699 235 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 TMEM161BQ8NDZ6 487 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 SPPL3Q8TCT6 385 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 KCNN1Q92952 543 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 ALG13Q9NP73 1137 aaKnown RBP19.08■□□□□ 0.65
MDC1-206ENST00000489540 HCSTQ9UBK5 93 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 PCDHA7Q9UN72 937 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 TNFSF13BQ9Y275 285 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 HES2Q9Y543 173 aa19.08■□□□□ 0.65
MDC1-206ENST00000489540 INPPL1O15357 1258 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 TBCAO75347 108 aaKnown RBP19.08■□□□□ 0.64
MDC1-206ENST00000489540 PPM1AP35813 382 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 NUCB2P80303 420 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 STRN3Q13033 797 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 DCAF4L1Q3SXM0 396 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 TIGD5Q53EQ6 642 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 SHC4Q6S5L8 630 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 RNF39Q9H2S5 420 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 TBC1D13Q9NVG8 400 aa19.08■□□□□ 0.64
MDC1-206ENST00000489540 PUF60Q9UHX1 559 aaKnown RBP19.08■□□□□ 0.64
MDC1-206ENST00000489540 FGF18O76093 207 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 MAPTP10636 758 aaKnown RBP19.07■□□□□ 0.64
MDC1-206ENST00000489540 ABCD1P33897 745 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 NCKAP1LP55160 1127 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 PLCB3Q01970 1234 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 KRT17Q04695 432 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 PDILTQ8N807 584 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 IQUBQ8NA54 791 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 SLC17A8Q8NDX2 589 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 POF1BQ8WVV4 589 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 DDX12PQ92771 950 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 ACO2Q99798 780 aaKnown RBP19.07■□□□□ 0.64
MDC1-206ENST00000489540 APOL6Q9BWW8 343 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 LRRC27Q9C0I9 530 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 CUEDC2Q9H467 287 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 NXF3Q9H4D5 531 aaKnown RBP19.07■□□□□ 0.64
MDC1-206ENST00000489540 ZHX3Q9H4I2 956 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 FAM13BQ9NYF5 915 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 SPG21Q9NZD8 308 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 PARP2Q9UGN5 583 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 USP20Q9Y2K6 914 aa19.07■□□□□ 0.64
MDC1-206ENST00000489540 A0A087X0B3 334 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 ARL5CA6NH57 179 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 TRAK2O60296 914 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 EDN1P05305 212 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 BCAR1P56945 870 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 TAS1R3Q7RTX0 852 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 HAUS6Q7Z4H7 955 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 SPATA32Q96LK8 384 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 FAM193BQ96PV7 902 aaPredicted RBP19.06■□□□□ 0.64
MDC1-206ENST00000489540 GAD1Q99259 594 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 NRDE2Q9H7Z3 1164 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 LZTS1Q9Y250 596 aa19.06■□□□□ 0.64
MDC1-206ENST00000489540 CHD7Q9P2D1 2997 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 ZMYM2Q9UBW7 1377 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 MYMKA6NI61 221 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 AKAP5P24588 427 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 MLH1P40692 756 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 SKIV2LQ15477 1246 aaKnown RBP19.05■□□□□ 0.64
MDC1-206ENST00000489540 EEF1DP3Q658K8 133 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 DYMQ7RTS9 669 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 LEO1Q8WVC0 666 aaPredicted RBP19.05■□□□□ 0.64
MDC1-206ENST00000489540 PYM1Q9BRP8 204 aaKnown RBP19.05■□□□□ 0.64
MDC1-206ENST00000489540 TARS2Q9BW92 718 aaKnown RBP19.05■□□□□ 0.64
MDC1-206ENST00000489540 SCAND2PQ9GZW5 306 aaPredicted RBP19.05■□□□□ 0.64
MDC1-206ENST00000489540 NSUN3Q9H649 340 aaKnown RBP19.05■□□□□ 0.64
MDC1-206ENST00000489540 PTPRHQ9HD43 1115 aa19.05■□□□□ 0.64
MDC1-206ENST00000489540 ZC3H11AO75152 810 aaKnown RBP eCLIP19.04■□□□□ 0.646e-9■■□□□ 11.8
MDC1-206ENST00000489540 POMCP01189 267 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 ALDH2P05091 517 aa19.04■□□□□ 0.64
MDC1-206ENST00000489540 GALTP07902 379 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms