RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 NELFCDQ8IXH7 590 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 FAM186BQ8IYM0 893 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 MSL3Q8N5Y2 521 aaKnown RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 CEP112Q8N8E3 955 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 XXYLT1Q8NBI6 393 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 BANK1Q8NDB2 785 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 GPRC5AQ8NFJ5 357 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 TRIM58Q8NG06 486 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 AFAP1L1Q8TED9 768 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 PIGOQ8TEQ8 1089 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 LRRC15Q8TF66 581 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 LMBR1Q8WVP7 490 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 SEPT1Q8WYJ6 367 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ZNF592Q92610 1267 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 CEP170P1Q96L14 293 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 PARK7Q99497 189 aaKnown RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 TTYH3Q9C0H2 523 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ASCC2Q9H1I8 757 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 L2HGDHQ9H9P8 463 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 ARGLU1Q9NWB6 273 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 SIK3Q9Y2K2 1263 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 DIS3Q9Y2L1 958 aaKnown RBP6.94□□□□□ -1.3
SF3A3-208ENST00000489537 IGSF9BQ9UPX0 1349 aa6.94□□□□□ -1.3
SF3A3-208ENST00000489537 PHIPQ8WWQ0 1821 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 ASAP2O43150 1006 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 CTIFO43310 598 aaKnown RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 TACC1O75410 805 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 FERP16591 822 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 GARTP22102 1010 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MCM3P25205 808 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 CTGFP29279 349 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 AP3M2P53677 418 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 INHBEP58166 350 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 ACTR2P61160 394 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 POU5F1Q01860 360 aaKnown RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MLLT1Q03111 559 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 STRN3Q13033 797 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 CRHR2Q13324 411 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MOGSQ13724 837 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MXD4Q14582 209 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 TTLL4Q14679 1199 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 LRRC41Q15345 812 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 SURF1Q15526 300 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 TCERG1LQ5VWI1 586 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 CCDC70Q6NSX1 233 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 ABHD15Q6UXT9 468 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 ENOSF1Q7L5Y1 443 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 HAUS6Q7Z4H7 955 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 APBB1IPQ7Z5R6 666 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 FAM133AQ8N9E0 248 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MORC4Q8TE76 937 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 SMCR8Q8TEV9 937 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 SCFD2Q8WU76 684 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 OPTNQ96CV9 577 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MMP19Q99542 508 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 STRA6Q9BX79 667 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 NIFKQ9BYG3 293 aaKnown RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 ARHGAP39Q9C0H5 1083 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 C2orf40Q9H1Z8 148 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 NHEJ1Q9H9Q4 299 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MLXIPQ9HAP2 919 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 VTA1Q9NP79 307 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 ZNF302Q9NR11 478 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 AGPAT3Q9NRZ7 376 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 DMAC2Q9NW81 257 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 AIPL1Q9NZN9 384 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 RNF14Q9UBS8 474 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 INTUQ9ULD6 942 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 RIPK3Q9Y572 518 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 MAFBQ9Y5Q3 323 aaPredicted RBP6.93□□□□□ -1.3
SF3A3-208ENST00000489537 PDE4DIPQ5VU43 2346 aa6.93□□□□□ -1.3
SF3A3-208ENST00000489537 RBBP6Q7Z6E9 1792 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 SOWAHDA6NJG2 315 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 EFCAB8A8MWE9 144 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 DDX39AO00148 427 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 NOP56O00567 594 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 WIPF1O43516 503 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 ZC3H11AO75152 810 aaKnown RBP eCLIP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 LCA5LO95447 670 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 ERCC3P19447 782 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 MAPK4P31152 587 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 STAT1P42224 750 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 NAMPTP43490 491 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 STAT5BP51692 787 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 VAV2P52735 878 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 POLGP54098 1239 aaPredicted RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 WDR4P57081 412 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 CKAP4Q07065 602 aaKnown RBP6.92□□□□□ -1.3
SF3A3-208ENST00000489537 RAD51AP2Q09MP3 1159 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 KLHL30Q0D2K2 578 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 LAMC2Q13753 1193 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 TFDP1Q14186 410 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 ASIC2Q16515 512 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 KYAT1Q16773 422 aa6.92□□□□□ -1.3
SF3A3-208ENST00000489537 WHAMMP3Q1A5X7 153 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms