RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 AKTIPQ9H8T0 292 aa10.04□□□□□ -0.8
TNRC6B-208ENST00000489500 BARHL2Q9NY43 387 aa10.04□□□□□ -0.8
TNRC6B-208ENST00000489500 FAM13BQ9NYF5 915 aa10.04□□□□□ -0.8
TNRC6B-208ENST00000489500 RWDD3Q9Y3V2 267 aa10.04□□□□□ -0.8
TNRC6B-208ENST00000489500 NLRC5Q86WI3 1866 aa10.04□□□□□ -0.8
TNRC6B-208ENST00000489500 NFASCO94856 1347 aa10.04□□□□□ -0.8
TNRC6B-208ENST00000489500 EPB41L2O43491 1005 aaKnown RBP10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 EIF5BO60841 1220 aaKnown RBP10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 CTSHP09668 335 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 ITGB5P18084 799 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 HOXC8P31273 242 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 ERVK-21P61565 698 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 DEFB103AP81534 67 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 RALGAPA2Q2PPJ7 1873 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 CEP55Q53EZ4 464 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 WWC2Q6AWC2 1192 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 CPLX2Q6PUV4 134 aaKnown RBP10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 ADAMTSL4Q6UY14 1074 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 NIPA1Q7RTP0 329 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 PLPPR4Q7Z2D5 763 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 RPAINQ86UA6 219 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 LMBR1Q8WVP7 490 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 JAKMIP1Q96N16 626 aaKnown RBP10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 KRTAP4-8Q9BYQ9 185 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 ANO3Q9BYT9 981 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 KCNH7Q9NS40 1196 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 TUBE1Q9UJT0 475 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 MTCH2Q9Y6C9 303 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 LOXHD1Q8IVV2 1947 aa10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 TCF20Q9UGU0 1960 aaKnown RBP10.03□□□□□ -0.8
TNRC6B-208ENST00000489500 PRRC2BQ5JSZ5 2229 aaKnown RBP10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 LAMA2P24043 3122 aaKnown RBP10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 F8W735 103 aaPredicted RBP10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 ATP9AO75110 1047 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 SCG2P13521 617 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 MARK3P27448 753 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 SREBF1P36956 1147 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 STAT5BP51692 787 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 SETQ01105 290 aaPredicted RBP10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 GRB10Q13322 594 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 GPNMBQ14956 572 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 PFKFB3Q16875 520 aaPredicted RBP10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 MIS18BP1Q6P0N0 1132 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 Q6ZUG5 572 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 NME8Q8N427 588 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 FTHL17Q9BXU8 183 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 MRPL18Q9H0U6 180 aaKnown RBP10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 TBC1D22BQ9NU19 505 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 SQORQ9Y6N5 450 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 EVPLQ92817 2033 aa10.02□□□□□ -0.81
TNRC6B-208ENST00000489500 GSTTP1A0A1W2PQM5 241 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 ESYT2A0FGR8 921 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 LINC01553A4QN01 128 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 STXBP3O00186 592 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 RFXAPO00287 272 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 MEIS1O00470 390 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 CPLX1O14810 134 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 PRPF3O43395 683 aaKnown RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 STAG3L1P0CL83 205 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 HSPA4P34932 840 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 ACTR2P61160 394 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 IGBP1P78318 339 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 MRPS6P82932 125 aaKnown RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 HYAL2Q12891 473 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 ADCK5Q3MIX3 580 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 TTC39BQ5VTQ0 682 aaPredicted RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 ATCAYQ86WG3 371 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 PLA2G4DQ86XP0 818 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 CKAP2LQ8IYA6 745 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 REXO1Q8N1G1 1221 aaKnown RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 TMEM130Q8N3G9 435 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 FIBCD1Q8N539 461 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 GALNT11Q8NCW6 608 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 BRF1Q92994 677 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 WNT8BQ93098 351 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 IL17RAQ96F46 866 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 TCEANC2Q96MN5 208 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 UHRF1Q96T88 793 aaPredicted RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 LACRTQ9GZZ8 138 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 BCAS3Q9H6U6 928 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 FNDC3AQ9Y2H6 1198 aaKnown RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 PPME1Q9Y570 386 aa10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 COL4A4P53420 1690 aaPredicted RBP10.01□□□□□ -0.81
TNRC6B-208ENST00000489500 WDR81Q562E7 1941 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 LINC01387J3KSC0 135 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 HBP1O60381 514 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 GHRP10912 638 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 INSRRP14616 1297 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 RPS6KB1P23443 525 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 SCNN1AP37088 669 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 ADAM17P78536 824 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 HTRA4P83105 476 aaPredicted RBP10□□□□□ -0.81
TNRC6B-208ENST00000489500 APOBRQ0VD83 1088 aa10□□□□□ -0.81
TNRC6B-208ENST00000489500 TIGD5Q53EQ6 642 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms