RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 PIK3AP1Q6ZUJ8 805 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 TPH2Q8IWU9 490 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 TMEM105Q8N8V8 129 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 ZNF579Q8NAF0 562 aaKnown RBP13.29□□□□□ -0.28
SFXN3-207ENST00000489434 STAMQ92783 540 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 RPS6KC1Q96S38 1066 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 MTRQ99707 1265 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 TRIM6Q9C030 488 aaPredicted RBP13.29□□□□□ -0.28
SFXN3-207ENST00000489434 SMOC2Q9H3U7 446 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 BRMS1Q9HCU9 246 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 BMP2KQ9NSY1 1161 aaPredicted RBP13.29□□□□□ -0.28
SFXN3-207ENST00000489434 RGL1Q9NZL6 768 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 IGSF9Q9P2J2 1179 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 PRG3Q9Y2Y8 225 aaPredicted RBP13.29□□□□□ -0.28
SFXN3-207ENST00000489434 STK36Q9NRP7 1315 aa13.29□□□□□ -0.28
SFXN3-207ENST00000489434 DENND4AQ7Z401 1863 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 ARL5CA6NH57 179 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 PROB1E7EW31 1015 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 INO80B-WBP1J3KQ70 363 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 B4GALT3O60512 393 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 LILRB3O75022 631 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 GLUD1P00367 558 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 OR1G1P47890 313 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 GLUD2P49448 558 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 CYP4A11Q02928 519 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 UBXN11Q5T124 520 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 FLCNQ8NFG4 579 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
SFXN3-207ENST00000489434 HERC2P3Q9BVR0 1158 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 COLEC11Q9BWP8 271 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 MAN1C1Q9NR34 630 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
SFXN3-207ENST00000489434 IPPQ9Y573 584 aa13.28□□□□□ -0.28
SFXN3-207ENST00000489434 RFX1P22670 979 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 AFF1P51825 1210 aaKnown RBP13.27□□□□□ -0.29
SFXN3-207ENST00000489434 PTENP60484 403 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 POU5F1BQ06416 359 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 CTTNQ14247 550 aaKnown RBP13.27□□□□□ -0.29
SFXN3-207ENST00000489434 POTEDQ86YR6 584 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 HAS1Q92839 578 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 DYDC2Q96IM9 177 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 GAD1Q99259 594 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 CSRNP2Q9H175 543 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 KCNK12Q9HB15 430 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 C2orf16Q68DN1 1984 aa13.27□□□□□ -0.29
SFXN3-207ENST00000489434 CCDC195A0A1B0GUA6 201 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 TDRD15B5MCY1 1934 aaKnown RBP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 STK25O00506 426 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 INPPL1O15357 1258 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 TEX28O15482 410 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 TSPAN1O60635 241 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 PFKFB2O60825 505 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 DGAT1O75907 488 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 GBP2P32456 591 aaPredicted RBP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 KRT2P35908 639 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 MLH1P40692 756 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 NBL1P41271 181 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 CREMQ03060 361 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 SCRN1Q12765 414 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 ANKRD1Q15327 319 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 GVINP1Q7Z2Y8 2422 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 COLGALT2Q8IYK4 626 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 SMG8Q8ND04 991 aaKnown RBP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 OXER1Q8TDS5 423 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 HDAC7Q8WUI4 952 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 NKD2Q969F2 451 aaPredicted RBP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 RTP3Q9BQQ7 232 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 APOL6Q9BWW8 343 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 PLEKHA4Q9H4M7 779 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 PIDD1Q9HB75 910 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 WDR6Q9NNW5 1121 aaKnown RBP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 ANKEF1Q9NU02 776 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
SFXN3-207ENST00000489434 DUSP12Q9UNI6 340 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 GIT1Q9Y2X7 761 aa13.26□□□□□ -0.29
SFXN3-207ENST00000489434 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 SLITRK3O94933 977 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 C1RP00736 705 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 AOC1P19801 751 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 SCNN1GP51170 649 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 DSG1Q02413 1049 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 DSC1Q08554 894 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 SPIRE1Q08AE8 756 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 CALCRLQ16602 461 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 KIAA0319Q5VV43 1072 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 IFNLR1Q8IU57 520 aaPredicted RBP13.25□□□□□ -0.29
SFXN3-207ENST00000489434 SIX5Q8N196 739 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 SMG7Q92540 1137 aaKnown RBP13.25□□□□□ -0.29
SFXN3-207ENST00000489434 NXPE3Q969Y0 559 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 CPB2Q96IY4 423 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 ZFP42Q96MM3 310 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 EIF2AK1Q9BQI3 630 aaKnown RBP13.25□□□□□ -0.29
SFXN3-207ENST00000489434 EIF2AQ9BY44 585 aaKnown RBP13.25□□□□□ -0.29
SFXN3-207ENST00000489434 RXFP1Q9HBX9 757 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 MARCH5Q9NX47 278 aa13.25□□□□□ -0.29
SFXN3-207ENST00000489434 CLUHO75153 1309 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms