RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CEP131Q9UPN4 1083 aa13.08□□□□□ -0.32
HDAC6-233ENST00000489352 PRG3Q9Y2Y8 225 aaPredicted RBP13.08□□□□□ -0.32
HDAC6-233ENST00000489352 FREM2Q5SZK8 3169 aa13.08□□□□□ -0.32
HDAC6-233ENST00000489352 NFASCO94856 1347 aa13.08□□□□□ -0.32
HDAC6-233ENST00000489352 PALM3A6NDB9 673 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-233ENST00000489352 SPDYE3A6NKU9 549 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 CYSRT1A8MQ03 144 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 PIK3CDO00329 1044 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 DDHD2O94830 711 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 DARSP14868 501 aaKnown RBP13.07□□□□□ -0.32
HDAC6-233ENST00000489352 CSRP1P21291 193 aaKnown RBP13.07□□□□□ -0.32
HDAC6-233ENST00000489352 RAP1GAPP47736 663 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 RAB27AP51159 221 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 DSG1Q02413 1049 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 CREMQ03060 361 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 TROAPQ12815 778 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 IRF7Q92985 503 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 LRIG1Q96JA1 1093 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 BBC3Q96PG8 261 aaPredicted RBP13.07□□□□□ -0.32
HDAC6-233ENST00000489352 KCNH7Q9NS40 1196 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 ZSWIM5Q9P217 1185 aa13.07□□□□□ -0.32
HDAC6-233ENST00000489352 MYO18BQ8IUG5 2567 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 TDRD15B5MCY1 1934 aaKnown RBP13.06□□□□□ -0.32
HDAC6-233ENST00000489352 MEIS2O14770 477 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 FGD1P98174 961 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 SWSAP1Q6NVH7 229 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 MIS18BP1Q6P0N0 1132 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 KBTBD6Q86V97 674 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 HNRNPLLQ8WVV9 542 aaKnown RBP13.06□□□□□ -0.32
HDAC6-233ENST00000489352 GAB3Q8WWW8 586 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 ING5Q8WYH8 240 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 MCRS1Q96EZ8 462 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 TRMT61BQ9BVS5 477 aaKnown RBP13.06□□□□□ -0.32
HDAC6-233ENST00000489352 GCOM2Q9BZD3 368 aaPredicted RBP13.06□□□□□ -0.32
HDAC6-233ENST00000489352 SLC32A1Q9H598 525 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 ZBTB40Q9NUA8 1239 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 FAM105AQ9NUU6 356 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 FNIP2Q9P278 1114 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 KLK13Q9UKR3 277 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 PIN4Q9Y237 131 aaKnown RBP13.06□□□□□ -0.32
HDAC6-233ENST00000489352 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
HDAC6-233ENST00000489352 WDR81Q562E7 1941 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 ZBTB42B2RXF5 422 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 K7ESF4 209 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 DDX39AO00148 427 aaKnown RBP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 CCL16O15467 120 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 CSDE1O75534 798 aaKnown RBP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 PAPSS2O95340 614 aaPredicted RBP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 ATG7O95352 703 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 POMCP01189 267 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 CHRNB1P11230 501 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 SFPQP23246 707 aaKnown RBP eCLIP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 PABPC1LQ4VXU2 614 aaKnown RBP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 TCEAL6Q6IPX3 200 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 LILRA6Q6PI73 481 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 NPAS3Q8IXF0 933 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 LRRC71Q8N4P6 559 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 TCEAL3Q969E4 200 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 ELSPBP1Q96BH3 223 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 TRAIPQ9BWF2 469 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 PSTPIP2Q9H939 334 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 TMEM9BQ9NQ34 198 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 SEC63Q9UGP8 760 aaKnown RBP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 TCEAL9Q9UHQ7 104 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 KCNH3Q9ULD8 1083 aa13.05□□□□□ -0.32
HDAC6-233ENST00000489352 MRPS23Q9Y3D9 190 aaKnown RBP13.05□□□□□ -0.32
HDAC6-233ENST00000489352 IGKV6D-21A0A0A0MT36 114 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 MEIS3P2A8K0S8 358 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 B4GALT3O60512 393 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 GPC3P51654 580 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 MFAP1P55081 439 aaKnown RBP13.04□□□□□ -0.32
HDAC6-233ENST00000489352 CREB5Q02930 508 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 PTGDRQ13258 359 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 GRM2Q14416 872 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 UAP1L1Q3KQV9 507 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 USP41Q3LFD5 358 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 ZNF605Q86T29 641 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 CCDC60Q8IWA6 550 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-233ENST00000489352 MXRA8Q9BRK3 442 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 KRT23Q9C075 422 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 INO80BQ9C086 356 aaPredicted RBP13.04□□□□□ -0.32
HDAC6-233ENST00000489352 RSAD1Q9HA92 442 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 GDE1Q9NZC3 331 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 DACH1Q9UI36 760 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 NUP205Q92621 2012 aa13.04□□□□□ -0.32
HDAC6-233ENST00000489352 SHISA7A6NL88 538 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 ZNF623O75123 536 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 CAVIN2O95810 425 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 C8AP07357 584 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 RPL17P18621 184 aaKnown RBP13.03□□□□□ -0.32
HDAC6-233ENST00000489352 CCNE1P24864 410 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 HOXA6P31267 233 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 ELF2Q15723 593 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 TANGO2Q6ICL3 276 aa13.03□□□□□ -0.32
HDAC6-233ENST00000489352 ABHD15Q6UXT9 468 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms