RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 TMEM169Q96HH4 297 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 IGSF21Q96ID5 467 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 PRIMPOLQ96LW4 560 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 PNMA5Q96PV4 448 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 KIFC3Q9BVG8 833 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 APOL6Q9BWW8 343 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 CCDC113Q9H0I3 377 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 C2orf40Q9H1Z8 148 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 UBN1Q9NPG3 1134 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 BARX2Q9UMQ3 279 aaPredicted RBP27.63■■■□□ 2.01
HMGN1-217ENST00000489072 USP20Q9Y2K6 914 aa27.63■■■□□ 2.01
HMGN1-217ENST00000489072 INPPL1O15357 1258 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 EDN1P05305 212 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 BRAPQ7Z569 592 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 DEPTORQ8TB45 409 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 KIFAP3Q92845 792 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 GAD1Q99259 594 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 CDCA3Q99618 268 aaPredicted RBP27.62■■■□□ 2.01
HMGN1-217ENST00000489072 RUSC1Q9BVN2 902 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 TRIM6Q9C030 488 aaPredicted RBP27.62■■■□□ 2.01
HMGN1-217ENST00000489072 KANSL3Q9P2N6 904 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 CD207Q9UJ71 328 aa27.62■■■□□ 2.01
HMGN1-217ENST00000489072 VPS37CA5D8V6 355 aaPredicted RBP27.61■■■□□ 2.01
HMGN1-217ENST00000489072 ARL5CA6NH57 179 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 MBTPS2O43462 519 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 MLH1P40692 756 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 PPP2R5AQ15172 486 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 ZRSR1Q15695 479 aaKnown RBP27.61■■■□□ 2.01
HMGN1-217ENST00000489072 HYIQ5T013 277 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 DAW1Q8N136 415 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 ZFP42Q96MM3 310 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 VN1R3Q9BXE9 311 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 MIOSQ9NXC5 875 aa27.61■■■□□ 2.01
HMGN1-217ENST00000489072 PRKCBP05771 671 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 SMAD4Q13485 552 aaKnown RBP27.6■■■□□ 2.01
HMGN1-217ENST00000489072 KCNC3Q14003 757 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 RINT1Q6NUQ1 792 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 VPS52Q8N1B4 723 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 IFT74Q96LB3 600 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 ZBP1Q9H171 429 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 PDZD7Q9H5P4 517 aa27.6■■■□□ 2.01
HMGN1-217ENST00000489072 CARNS1A5YM72 827 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 C2orf71A6NGG8 1288 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 ACKR2O00590 384 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 LIG1P18858 919 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 AKAP5P24588 427 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 SCNN1GP51170 649 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 MAPK7Q13164 816 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 PRPF4BQ13523 1007 aaKnown RBP27.59■■■□□ 2.01
HMGN1-217ENST00000489072 SMC1AQ14683 1233 aaKnown RBP27.59■■■□□ 2.01
HMGN1-217ENST00000489072 MAPK6Q16659 721 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 C1orf186Q6ZWK4 172 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 DDX53Q86TM3 631 aaKnown RBP27.59■■■□□ 2.01
HMGN1-217ENST00000489072 MRPL43Q8N983 215 aaKnown RBP27.59■■■□□ 2.01
HMGN1-217ENST00000489072 FAM193BQ96PV7 902 aaPredicted RBP27.59■■■□□ 2.01
HMGN1-217ENST00000489072 PLIN2Q99541 437 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 TMEM175Q9BSA9 504 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 FAM50BQ9Y247 325 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 GIT1Q9Y2X7 761 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 MYH11P35749 1972 aa27.59■■■□□ 2.01
HMGN1-217ENST00000489072 HIP1RO75146 1068 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 PDCP20941 246 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 COASYQ13057 564 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 SMAD2Q15796 467 aaKnown RBP27.58■■■□□ 2.01
HMGN1-217ENST00000489072 COLGALT2Q8IYK4 626 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 SMRP1Q8NCR6 262 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 GSTCDQ8NEC7 633 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 AUTS2Q8WXX7 1259 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 KHSRPQ92945 711 aaKnown RBP eCLIP27.58■■■□□ 2.011e-7■■□□□ 13.3
HMGN1-217ENST00000489072 GTF3C3Q9Y5Q9 886 aa27.58■■■□□ 2.01
HMGN1-217ENST00000489072 NRP1O14786 923 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 N4BP3O15049 544 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 SYT1P21579 422 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 DSC1Q08554 894 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 TMEM119Q4V9L6 283 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 EEF1DP3Q658K8 133 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 HACE1Q8IYU2 909 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 INTS4Q96HW7 963 aaKnown RBP27.57■■■□□ 2
HMGN1-217ENST00000489072 FOXD4L1Q9NU39 408 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 KLK14Q9P0G3 267 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 FAN1Q9Y2M0 1017 aa27.57■■■□□ 2
HMGN1-217ENST00000489072 FSD2A1L4K1 749 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 K7ELQ4 463 aaPredicted RBP27.56■■■□□ 2
HMGN1-217ENST00000489072 CXCL14O95715 111 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 ALDH2P05091 517 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 EFNA5P52803 228 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 PEX3P56589 373 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 GRIN1Q05586 938 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 ZP2Q05996 745 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 SF3A1Q15459 793 aaKnown RBP27.56■■■□□ 2
HMGN1-217ENST00000489072 NT5DC1Q5TFE4 455 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 LLGL2Q6P1M3 1020 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 TMEM184AQ6ZMB5 413 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 GJD3Q8N144 294 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 NT5C3AQ9H0P0 336 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 PARP2Q9UGN5 583 aa27.56■■■□□ 2
HMGN1-217ENST00000489072 BMP15O95972 392 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 CTSAP10619 480 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 NPTX2P47972 431 aa27.55■■■□□ 2
HMGN1-217ENST00000489072 RESTQ13127 1097 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms