RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 TLR9Q9NR96 1032 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 TBC1D13Q9NVG8 400 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 HCSTQ9UBK5 93 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 FBXO2Q9UK22 296 aaPredicted RBP15.74■□□□□ 0.11
BRCA1-218ENST00000489037 LZTS1Q9Y250 596 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 GIT1Q9Y2X7 761 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 ATG2AQ2TAZ0 1938 aa15.74■□□□□ 0.11
BRCA1-218ENST00000489037 MEIS3P2A8K0S8 358 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 H0YCG3 227 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 F13A1P00488 732 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 PLCG1P19174 1290 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 NPTX2P47972 431 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 BCAR1P56945 870 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 RAD51AP2Q09MP3 1159 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 BECN1Q14457 450 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 GPBP1Q86WP2 473 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 CDR2LQ86X02 465 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-218ENST00000489037 SMG8Q8ND04 991 aaKnown RBP15.73■□□□□ 0.11
BRCA1-218ENST00000489037 MRPS27Q92552 414 aaKnown RBP15.73■□□□□ 0.11
BRCA1-218ENST00000489037 RAD54LQ92698 747 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 TMEM169Q96HH4 297 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 ASB2Q96Q27 587 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 KIFC3Q9BVG8 833 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 TMEM134Q9H6X4 195 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 LARSQ9P2J5 1176 aaKnown RBP15.73■□□□□ 0.11
BRCA1-218ENST00000489037 PARP2Q9UGN5 583 aa15.73■□□□□ 0.11
BRCA1-218ENST00000489037 MORC2Q9Y6X9 1032 aaPredicted RBP15.73■□□□□ 0.11
BRCA1-218ENST00000489037 SFI1A8K8P3 1242 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 SPTLC2O15270 562 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 NR1I2O75469 434 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 FAM13AO94988 1023 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 ALDH2P05091 517 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 PLS3P13797 630 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 DDIT3P35638 169 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 NASPP49321 788 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-218ENST00000489037 STRN3Q13033 797 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 MCM6Q14566 821 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 DCAF4L1Q3SXM0 396 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 SPECC1Q5M775 1068 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 RRAGBQ5VZM2 374 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 DAW1Q8N136 415 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
BRCA1-218ENST00000489037 EPSTI1Q96J88 318 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 CLIC6Q96NY7 704 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 RPS6KC1Q96S38 1066 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 MRPL4Q9BYD3 311 aaKnown RBP15.72■□□□□ 0.11
BRCA1-218ENST00000489037 CCDC113Q9H0I3 377 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 NRDE2Q9H7Z3 1164 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 UBE2ZQ9H832 354 aaPredicted RBP15.72■□□□□ 0.11
BRCA1-218ENST00000489037 TFIP11Q9UBB9 837 aaKnown RBP15.72■□□□□ 0.11
BRCA1-218ENST00000489037 STK17AQ9UEE5 414 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 ODF2LQ9ULJ1 636 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 HES2Q9Y543 173 aa15.72■□□□□ 0.11
BRCA1-218ENST00000489037 TCF20Q9UGU0 1960 aaKnown RBP15.72■□□□□ 0.11
BRCA1-218ENST00000489037 FSD2A1L4K1 749 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 SLC16A4O15374 487 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 YEATS4O95619 227 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 POMCP01189 267 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 DNAJB1P25685 340 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 PBX3P40426 434 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 MAPK7Q13164 816 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 ATF7IP2Q5U623 682 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 ATL3Q6DD88 541 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 CCDC73Q6ZRK6 1079 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 TMC7Q7Z402 723 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 SLC39A11Q8N1S5 342 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 LINC00301Q8NCQ3 95 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 SPIRE2Q8WWL2 714 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 PABPC5Q96DU9 382 aaKnown RBP15.71■□□□□ 0.11
BRCA1-218ENST00000489037 GAD1Q99259 594 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 TMEM175Q9BSA9 504 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 NXF3Q9H4D5 531 aaKnown RBP15.71■□□□□ 0.11
BRCA1-218ENST00000489037 ZHX3Q9H4I2 956 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 PDZD7Q9H5P4 517 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 IGFLR1Q9H665 355 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 NGRNQ9NPE2 291 aaKnown RBP15.71■□□□□ 0.11
BRCA1-218ENST00000489037 ENTPD7Q9NQZ7 604 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 BLOC1S4Q9NUP1 217 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 STK39Q9UEW8 545 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 CFAP45Q9UL16 551 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 FAN1Q9Y2M0 1017 aa15.71■□□□□ 0.11
BRCA1-218ENST00000489037 TRIP11Q15643 1979 aa15.71■□□□□ 0.1
BRCA1-218ENST00000489037 NPHP3-ACAD11A0A0J9YXS1 232 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 ARL5CA6NH57 179 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 NT5C1B-RDH14C9J2C7 533 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 PPP6R2O75170 966 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 TBCAO75347 108 aaKnown RBP15.7■□□□□ 0.1
BRCA1-218ENST00000489037 GALTP07902 379 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 SCP2P22307 547 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 AKAP5P24588 427 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 CA8P35219 290 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 MLH1P40692 756 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 CAMK1Q14012 370 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 FOXD4L6Q3SYB3 417 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-218ENST00000489037 FOXD4L3Q6VB84 417 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-218ENST00000489037 MYCT1Q8N699 235 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 TMEM87AQ8NBN3 555 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 TCF25Q9BQ70 676 aa15.7■□□□□ 0.1
BRCA1-218ENST00000489037 NTPCRQ9BSD7 190 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms