RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ART4Q93070 314 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 VTI1AQ96AJ9 217 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 TUFT1Q9NNX1 390 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 RGL1Q9NZL6 768 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 CTTNBP2NLQ9P2B4 639 aa20.98■□□□□ 0.95
HMG20B-213ENST00000488973 CPSF2Q9P2I0 782 aaKnown RBP20.98■□□□□ 0.95
HMG20B-213ENST00000488973 LOXHD1Q8IVV2 1947 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 LTBP1Q14766 1721 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 FOXN3O00409 490 aaPredicted RBP20.97■□□□□ 0.95
HMG20B-213ENST00000488973 EML1O00423 815 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 COQ9O75208 318 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 COG2Q14746 738 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 PHLDB3Q6NSJ2 640 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 STXBP4Q6ZWJ1 553 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 CCHCR1Q8TD31 782 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 HSD17B14Q9BPX1 270 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 SNX3O60493 162 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 OAS1P00973 400 aaKnown RBP20.97■□□□□ 0.95
HMG20B-213ENST00000488973 TRIM49P0CI25 452 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 TRIM49CP0CI26 452 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 BCRP11274 1271 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 FGFR4P22455 802 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 PEX5P50542 639 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 GPC5P78333 572 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 RBBP5Q15291 538 aaKnown RBP20.97■□□□□ 0.95
HMG20B-213ENST00000488973 ZNF720Q7Z2F6 126 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 ZDHHC14Q8IZN3 488 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 RBM17Q96I25 401 aaKnown RBP20.97■□□□□ 0.95
HMG20B-213ENST00000488973 MTFR1LQ9H019 292 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 AGPAT3Q9NRZ7 376 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 HOMER3Q9NSC5 361 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 NYAP2Q9P242 653 aa20.97■□□□□ 0.95
HMG20B-213ENST00000488973 PLSCR1O15162 318 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 RAD21O60216 631 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 BBOX1O75936 387 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 FTLP02792 175 aaPredicted RBP20.96■□□□□ 0.95
HMG20B-213ENST00000488973 CYP3A4P08684 503 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 FIZ1Q96SL8 496 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 WNT8AQ9H1J5 351 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 EEF2P13639 858 aaKnown RBP20.96■□□□□ 0.95
HMG20B-213ENST00000488973 MARCKSL1P49006 195 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 ZNF268Q14587 947 aaPredicted RBP20.96■□□□□ 0.95
HMG20B-213ENST00000488973 UBAP2Q5T6F2 1119 aaKnown RBP20.96■□□□□ 0.95
HMG20B-213ENST00000488973 LMO3Q8TAP4 145 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 PIGOQ8TEQ8 1089 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 TCP11Q8WWU5 503 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 HOOK2Q96ED9 719 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 EBF2Q9HAK2 575 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 MTUS1Q9ULD2 1270 aa20.96■□□□□ 0.95
HMG20B-213ENST00000488973 RBBP6Q7Z6E9 1792 aaKnown RBP20.96■□□□□ 0.95
HMG20B-213ENST00000488973 MTA2O94776 668 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 IBSPP21815 317 aaPredicted RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 COILP38432 576 aaPredicted RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 CYP2J2P51589 502 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 ZNF131P52739 623 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 BFSP1Q12934 665 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 TRMT10CQ7L0Y3 403 aaKnown RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 EXOC3L1Q86VI1 746 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 FBXO11Q86XK2 927 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 SLC9A9Q8IVB4 645 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 ZNF513Q8N8E2 541 aaPredicted RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 IRAK4Q9NWZ3 460 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 PASKQ96RG2 1323 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 SIPA1L1O43166 1804 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 LRRN2O75325 713 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 CLTAP09496 248 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 SLCO1A2P46721 670 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 IFNAR2P48551 515 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 FAM133BQ5BKY9 247 aaKnown RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 TBC1D1Q86TI0 1168 aaPredicted RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 FAM178BQ8IXR5 827 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 UHMK1Q8TAS1 419 aaKnown RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 SLC20A1Q8WUM9 679 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 ABCF3Q9NUQ8 709 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 USP15Q9Y4E8 981 aaPredicted RBP20.95■□□□□ 0.94
HMG20B-213ENST00000488973 ADAMTSL1Q8N6G6 1762 aa20.95■□□□□ 0.94
HMG20B-213ENST00000488973 C6orf229H3BNL8 230 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 SLITRK3O94933 977 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 COMTP21964 271 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 ZNF76P36508 570 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 ZNF568Q3ZCX4 644 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 GBP7Q8N8V2 638 aaPredicted RBP20.94■□□□□ 0.94
HMG20B-213ENST00000488973 CYP2W1Q8TAV3 490 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 DBR1Q9UK59 544 aaKnown RBP20.94■□□□□ 0.94
HMG20B-213ENST00000488973 LRRC37AA6NMS7 1700 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 MYBPC2Q14324 1141 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 PDCD2Q16342 344 aaPredicted RBP20.94■□□□□ 0.94
HMG20B-213ENST00000488973 PNMA8AQ86V59 439 aaPredicted RBP20.94■□□□□ 0.94
HMG20B-213ENST00000488973 SLC13A5Q86YT5 568 aaPredicted RBP20.94■□□□□ 0.94
HMG20B-213ENST00000488973 KSR1Q8IVT5 923 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 CCDC105Q8IYK2 499 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 CD101Q93033 1021 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 TBC1D31Q96DN5 1066 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 CCDC113Q9H0I3 377 aa20.94■□□□□ 0.94
HMG20B-213ENST00000488973 SNUPNO95149 360 aaKnown RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 ALADP13716 330 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 NQO1P15559 274 aaKnown RBP20.93■□□□□ 0.94
HMG20B-213ENST00000488973 GALNTL6Q49A17 601 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 CDC42EP5Q6NZY7 148 aa20.93■□□□□ 0.94
HMG20B-213ENST00000488973 OTOP1Q7RTM1 612 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms